Gene CPS_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0478 
Symbol 
ID3518527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp479980 
End bp480669 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content39% 
IMG OID637282943 
Producthypothetical protein 
Protein accessionYP_267236 
Protein GI71278855 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CACTAGTAAA TATCGCACTC ACTTCCGCTT TAATAGCAGG TTCACTTGTA 
GCATCTTCAG CATTTGCTGT TGAAGGTTTG TCAGCAAACG TTGGAGCAAC TAGCAACTAT
TTATGGCGTG GCGTAACACA AACAGATGAC GCTGCCGCTA TTTCTGGTGG TATTGACTAT
GCACACGAAT CAGGATTCTA TGCTGGTACT TGGGCTTCTA ATGTAGACTT TGGTGATGAT
GCTAGTGCTG AACTAGATTT TTACTTAGGA TTTGGTGGTG AGTTAGGTCA AGGTTTTGGT
TACGATGTTG GTTACATTTA TTATGCTTAC CCTGATTCAG CTCAAACTGA CAGTACTAAT
GAATATGATT TTGGTGAAGT CTACGGCTCA TTAAGCTACT CATACTTTTC AGTTTCAGCC
AACTATGGTG TAAATAATGA TGATGGTGCT GAATGGGCTG ATAGCGCACT ATATATTTCT
GCTGACGCGG AAATTGAAGT TGCTGAAGGC TTAACTTTAG CGCTACACAT AGGTGATTAT
TCTTTCGATG ATGACTACAA AAGTGATGAT TATAGCGATT ATGGTGTAAG TTTAAGTAAA
GGTGGCTTCA CCTTCGCGGT ATCAGATACT GATATGGATA ACGATGATAT GAAATTTACA
GTTTCTTATT CTATTGATAT CGATTTATAG
 
Protein sequence
MKKTLVNIAL TSALIAGSLV ASSAFAVEGL SANVGATSNY LWRGVTQTDD AAAISGGIDY 
AHESGFYAGT WASNVDFGDD ASAELDFYLG FGGELGQGFG YDVGYIYYAY PDSAQTDSTN
EYDFGEVYGS LSYSYFSVSA NYGVNNDDGA EWADSALYIS ADAEIEVAEG LTLALHIGDY
SFDDDYKSDD YSDYGVSLSK GGFTFAVSDT DMDNDDMKFT VSYSIDIDL