| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0440 |
|---|
| Symbol | |
|---|
| ID | 3518379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 440948 |
|---|
| End bp | 441424 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637282905 |
|---|
| Product | thioesterase family protein |
|---|
| Protein accession | YP_267198 |
|---|
| Protein GI | 71278786 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1607] Acyl-CoA hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCAC CACAACGTGA CATAACTTTA AGATTTTTAG CCGAGCCACA AGATGTAAAT
TTTGGTGGTA AAGTGCATGG TGGCGCTGTG ATGAAATGGA TAGATTTAGC TGCTTATGCT
TGTGCTGCTG GTTGGAGTGG TCGTTATTGT GTTACCGCCT ATGCTGGTGG TATTCGTTTT
GTTGCCCCTA TTCATGTTGG TAGTTTAGTT GAAGTAGAAG CTAAAGTTAT TTACACCGGT
AACTCATCAA TACATATAGC GCTAGAAGTA AACGCTTGCG ATCCTAAATC CTTAAACCGT
CGTTTAACTA CTCACTGCAT TGTTATCATG GTCGCAGTTG ATCAAAATGG TCAATCTGAA
CGTGTGCCGC AATGGCAACC TCAAACGGAA GCAGATAAAA AACAACATGA GTCCGCGGTG
AAACTGATGG AAATGCGCAA ACAAATTGGT GAAGAAATGC AAATTTTTGT CGATTAA
|
|---|
| Protein sequence | MNAPQRDITL RFLAEPQDVN FGGKVHGGAV MKWIDLAAYA CAAGWSGRYC VTAYAGGIRF
VAPIHVGSLV EVEAKVIYTG NSSIHIALEV NACDPKSLNR RLTTHCIVIM VAVDQNGQSE
RVPQWQPQTE ADKKQHESAV KLMEMRKQIG EEMQIFVD
|
|---|
| |