| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0393 |
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| Symbol | fadB |
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| ID | 3520494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 396542 |
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| End bp | 398710 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637282858 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_267151 |
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| Protein GI | 71280031 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATATC AAGGCAAGAG CCTTTCAGCC CAATTACTCG AAGACGGCAT TGTAGAATTT
AAGTTCGATG CTCAGGGTTC AGTAAATAAG TTTGATCAAG CAACTTTTGA AGAATATATA
GCCGTAGTGG CCGCAATTAA TAACTGCAGT GAAGCTAAAG GCGTAATAGT TACTTCAGGC
AAATCAACAT TTATTGTTGG TGCTGACATT ACAGAATTTT TAGTTTCATT TAGTCAGCCA
GAAGATGCCT TAGCATCTTG GGCAAAAAAA GCCTCAGACG TTTTTGACTC ATTTGAAGAT
ATTCAATTAC CCACTATAGC CGCTATCAAT GGCATCGCTT TAGGCGGTGG TTGTGAAATG
ACGCTGGCAT GTGACTACCG AGTTGCAGCG ACTACTGCCA GTATCGGACT GCCAGAAGTT
AAACTAGGTT TGATGCCTGG TTTTGGTGGT ACTGTACGAC TACCTCGACT TATTGGTTTT
GATAATGCGG CAACTTGGAT GTCTACAGGT AAAGCATTCA AACCTGCAGC AGCACTAGCA
CAAGGTGCTA TTGATGCCGT TGTAGAACCA GAAAATTTAC AAGCTGCTGC TATTAGCATG
CTTAAACTGG CAATTGACGG CAAACTAGAT TGGCGCGCGA AACGCCAGCC GAAATTGGAA
GCATTAAAGT TATCGCCGAC AGAACTCATC ATGTCATCAA CTACCTGTAA AGGTATGATT
GCCGCTAAAG CGGGTAAACA TTATCCAGCA CCAATGGTTA TGATAAATAC ATTGATTGCT
AGTGCTAACT TAGATCGCAC TGGTGCAATG GCTGCTGAGA ATACTGGTTT TGCTAAATTA
GCGAAAACTG ATGCAGCAAC AGCACAAATT GGTTTGTTTA TGGCAGACCA AGTGATTAAA
GGCAAAGCTA AGAAAGCAAG TAAACTTGCG ACAAAAGCTG TCAATAAAGC CGCTGTATTA
GGTGCTGGTA TTATGGGTGG TGGTATTGCA TACCAATCAG CTTATAAAGG CACCCCGATC
ATTATGAAAG ATATTAATGA TCAAGCACTT GATTTAGGTT TAACAACCGC TACGGGCATT
TTAACTAAAC AAGTTGAACG TGGTCGTATG AATGCTAAGA AAATGGCAGG TGTATTAAAC
AACATCACTC CATCATTAAG TTATGACAGT GTTAAAGACG TAGATATTGT TGTTGAAGCG
GTTGTAGAAA ACCCTAAAGT TAAGGGCATG GTTTTAGCTG AAGTTGAAGG TGTGATCGGT
GAAGATGCGA TTCTAACGTC AAATACTTCT ACTATCTCCA TTGATTTATT GGCACAGAGT
GTAAAACGTC CACAAAACTT CTGTGGTATG CACTTTTTCA ACCCTGTAAA TAAAATGCCA
TTAGTAGAAG TTATTCGTGG CAAAGATACT TCAGATGAAA CGGTTGCGGC AGTCGTGGCT
TATGCCGCTA AAATGGGTAA ATCTCCGATT GTTGTTAATG ATTGTCCTGG TTTCTATGTT
AACCGTGTTT TATTCCCATA CTTTGCTGGT TTTAGCCAAT TAGTACTTGA AGGTGCTGAC
TTTACCGCTA TCGATAAAGT CATGGAAAAA CAATTCGGTT GGCCAATGGG CCCTGCCTAT
TTACTTGATG TTGTTGGCGT TGATACTGCT GATCACTGTA CAGGTGTTAT GTCATCTGGT
TTCCCTACGC GAATGAAAAA AATTGACAAC GACCCTGTTA GTACTCTTTA TGCTAACGAG
CGCTTAGGTC AAAAGAACGG TAAAGGCTTT TACGATCACA TCAAAGACAA GCGTGGTCGT
CCAATGAAAG TTCCAGCTCC TGTTGCTTAC GAGTTACTTG GTCAACATTG TGCTGATAAA
AAAGACTTTA GCAGCGAAGA AATCATAGCT CGAATGATGA TCCCTATGGT TAATGAAGTG
GTTCGTTGTT TAGAAGAAGG TGTAGTTGAT ACTGCAGCTG AAGCCGATAT GGGCTTAATC
TATGGCGTTG GTTTCCCTCC ATTTAGAGGT GGTGCAATTC GCTACCTAGA AACTCTAGGT
TTAGATAACT TCATCGCAAT GGCTGATAAG TATACTGATT TAGGTGAAAT TTATCATGTG
ACTGATGGCC TTCGTGAAAT GGCAAAATCA GGTAAATCTT ACTTCACTAC CGATGTTAAA
TTAGCTTAA
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| Protein sequence | MIYQGKSLSA QLLEDGIVEF KFDAQGSVNK FDQATFEEYI AVVAAINNCS EAKGVIVTSG
KSTFIVGADI TEFLVSFSQP EDALASWAKK ASDVFDSFED IQLPTIAAIN GIALGGGCEM
TLACDYRVAA TTASIGLPEV KLGLMPGFGG TVRLPRLIGF DNAATWMSTG KAFKPAAALA
QGAIDAVVEP ENLQAAAISM LKLAIDGKLD WRAKRQPKLE ALKLSPTELI MSSTTCKGMI
AAKAGKHYPA PMVMINTLIA SANLDRTGAM AAENTGFAKL AKTDAATAQI GLFMADQVIK
GKAKKASKLA TKAVNKAAVL GAGIMGGGIA YQSAYKGTPI IMKDINDQAL DLGLTTATGI
LTKQVERGRM NAKKMAGVLN NITPSLSYDS VKDVDIVVEA VVENPKVKGM VLAEVEGVIG
EDAILTSNTS TISIDLLAQS VKRPQNFCGM HFFNPVNKMP LVEVIRGKDT SDETVAAVVA
YAAKMGKSPI VVNDCPGFYV NRVLFPYFAG FSQLVLEGAD FTAIDKVMEK QFGWPMGPAY
LLDVVGVDTA DHCTGVMSSG FPTRMKKIDN DPVSTLYANE RLGQKNGKGF YDHIKDKRGR
PMKVPAPVAY ELLGQHCADK KDFSSEEIIA RMMIPMVNEV VRCLEEGVVD TAAEADMGLI
YGVGFPPFRG GAIRYLETLG LDNFIAMADK YTDLGEIYHV TDGLREMAKS GKSYFTTDVK
LA
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