Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0388 |
Symbol | |
ID | 3521515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 390021 |
End bp | 391424 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637282853 |
Product | putative amino acid permease |
Protein accession | YP_267146 |
Protein GI | 71281046 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAGC TACATTTACA TGAGAAAACG CTTGGAAAAA GGGATATATT TTTATTCTGT ATTTCAGCCG TATTATTACT AGATACCTTA GCTGCTGGGG CCGTAATGGG ACCAACAGTT ATCTTTTGGT GGGTAATACT GACTATCTTT TTTTTAGTAC CTTTCGGTGC TATCAGTACT GAACTTGGAT CAGCTTACCC TGAACAAGGC GGTATTTATG CTTGGGTAAA AAGGGCATAC GGCCAAAAAA TGGCATCACG AATTAGCTGG TATTACTGGT CTAATGTTGC CGTTTGGGTA CCTGCTATCT TCATTCTTTT TGCGGGCGTA TTCTCGCAAA TATTCATGCC TGATATGTCG CTAACAGCAC AAATCATCAT GGGTGTGGTA CTGATATGGG TTGTGGTTTT TGTTAATATT GTTGCCTTAA ATGTGGGTAA ATGGATCCCA AATATTGGGG CAGCGATCAA GTTAATTATC TTTGCATTAT TAATTATCGG TGGCATCTTG TATGGCATGG AGCACGGTAT AGCAAATGAA TTTACCTTAG ATACGATGAT CCCAAGCACA GAAAATGGCG GCTTGAGCTT ACAATATTTA CCTGCAGTTG TTTACGGTAT GCTCGGTTTT GAATTAGCCA GTGCTAGTAG CGCTGAAATG AAAGACCCAC GTAAAGATTT ACCTAAAGCT GTTTTCTCAT CAATTGCTGT AGTGGTAGGT GCATATATCT TAGCAACTAC TGCGATATTA ATTGCACAAC CTGCTGATAA AGTTGATGTA GTTGATGGTT TGATGGATAC CTTAGGTCAG TTCTTCGGTG GCAGTCCATT GGGTGATGCT TTCGTTGTTG TTCTCGGTGT TGGTGCGCTT TATACCTTCT TCTCCAATGG TGCAACGTGG GCAATGGGTG CTAATCGTGC AGCAGCAGAA GCGGCTATTG ATGATGAATT ACCGGCATTG TTTGCGGTTG AATCTAAGCA TGGTACACCA GTAGGTGCGT CTATATTACT TGGTATTTCT GCTTCAATAT TACTGATTTT ATATGGTGTG ATGGCGGGTA ATAACGAAGA TTTATTCTGG TCTTTATTTG CTTTTAGTGG TGTTATTTTT ATGTTGCCTT ACGTCGCTGT GTGTACAGCA TTTGTTAAAA TACGTGAAAC GCATATTGGT ATTAATGGCA AAATTGCAGA GGATGGCACG TTTAGATTTC CAGGTAGTCC TAAATTTGTA AAAACTTGCG CCTATCTTTG TGCCGCCATA TTAATGGTAA CGATAACGTT ATTTATTTAT GTACCAGGCG AGGGTGTTGC TTGGGAAGTA TTATGGGGTG CCATTGGTGT TATCATAATG GGTGAAGTAG TTACCTATCG TGGCATGAAA AAAATGAAAA CAGCTACAGT GTAA
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Protein sequence | MSELHLHEKT LGKRDIFLFC ISAVLLLDTL AAGAVMGPTV IFWWVILTIF FLVPFGAIST ELGSAYPEQG GIYAWVKRAY GQKMASRISW YYWSNVAVWV PAIFILFAGV FSQIFMPDMS LTAQIIMGVV LIWVVVFVNI VALNVGKWIP NIGAAIKLII FALLIIGGIL YGMEHGIANE FTLDTMIPST ENGGLSLQYL PAVVYGMLGF ELASASSAEM KDPRKDLPKA VFSSIAVVVG AYILATTAIL IAQPADKVDV VDGLMDTLGQ FFGGSPLGDA FVVVLGVGAL YTFFSNGATW AMGANRAAAE AAIDDELPAL FAVESKHGTP VGASILLGIS ASILLILYGV MAGNNEDLFW SLFAFSGVIF MLPYVAVCTA FVKIRETHIG INGKIAEDGT FRFPGSPKFV KTCAYLCAAI LMVTITLFIY VPGEGVAWEV LWGAIGVIIM GEVVTYRGMK KMKTATV
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