Gene CPS_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0338 
Symbol 
ID3519770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp349644 
End bp350126 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content40% 
IMG OID637282803 
ProductRNA-binding protein 
Protein accessionYP_267104 
Protein GI71279315 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCTC CAACGTTACA AACAGTCATC ATTGCTGTTG CATTTGCCAT CATCGCTTAT 
ATTGTCACTT TTGCCGTACC GGCTAGTTCT ATACTTATTG CCAGTTTAGT ATTTGTTAGT
GCATTTCTCG CACCTTTACT CACTGGTAGT CCATCAACCA ACACAGCTTC ATCTACATCC
AGTAATACTA TAGCTTCGGA TGAGGATGTT AGAACCCTTT ATGTTGGTAA CTTACCTTAT
AGAGCGAATG AAACCTCAGT ACGAGAGCTT TTCTCAGAAC ATGGTTCTGT ACATTCTGTA
CGTTTAATGA AAGATAAACA TACAGGGAAA CGTCGTGGTT TCGGTTTTGT TGAAATGGCT
TCTGATGATT TAGACAAAGC AATATCTGCA TTGAACGATA CTGAGTTTCA GCAACGTACA
CTGAAAGTAA GAGAAGCAAA GGAACGCCCT GAGCGAACTG AAGATAACAA TCAAGACGAC
TAA
 
Protein sequence
MKSPTLQTVI IAVAFAIIAY IVTFAVPASS ILIASLVFVS AFLAPLLTGS PSTNTASSTS 
SNTIASDEDV RTLYVGNLPY RANETSVREL FSEHGSVHSV RLMKDKHTGK RRGFGFVEMA
SDDLDKAISA LNDTEFQQRT LKVREAKERP ERTEDNNQDD