Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0338 |
Symbol | |
ID | 3519770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 349644 |
End bp | 350126 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637282803 |
Product | RNA-binding protein |
Protein accession | YP_267104 |
Protein GI | 71279315 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTCTC CAACGTTACA AACAGTCATC ATTGCTGTTG CATTTGCCAT CATCGCTTAT ATTGTCACTT TTGCCGTACC GGCTAGTTCT ATACTTATTG CCAGTTTAGT ATTTGTTAGT GCATTTCTCG CACCTTTACT CACTGGTAGT CCATCAACCA ACACAGCTTC ATCTACATCC AGTAATACTA TAGCTTCGGA TGAGGATGTT AGAACCCTTT ATGTTGGTAA CTTACCTTAT AGAGCGAATG AAACCTCAGT ACGAGAGCTT TTCTCAGAAC ATGGTTCTGT ACATTCTGTA CGTTTAATGA AAGATAAACA TACAGGGAAA CGTCGTGGTT TCGGTTTTGT TGAAATGGCT TCTGATGATT TAGACAAAGC AATATCTGCA TTGAACGATA CTGAGTTTCA GCAACGTACA CTGAAAGTAA GAGAAGCAAA GGAACGCCCT GAGCGAACTG AAGATAACAA TCAAGACGAC TAA
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Protein sequence | MKSPTLQTVI IAVAFAIIAY IVTFAVPASS ILIASLVFVS AFLAPLLTGS PSTNTASSTS SNTIASDEDV RTLYVGNLPY RANETSVREL FSEHGSVHSV RLMKDKHTGK RRGFGFVEMA SDDLDKAISA LNDTEFQQRT LKVREAKERP ERTEDNNQDD
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