| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0229 |
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| Symbol | cyoE |
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| ID | 3519168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 231565 |
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| End bp | 232518 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637282695 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_266996 |
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| Protein GI | 71278210 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00331639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAAAG TAATTAATAA AACCATAACA CCTATGCCAT CGGTGATTAA TACCGGCCAC
CATCACTTTT CCATTAGTAA CATATTTGCT AATTGGCGTG CTTATTACGA CATTACCAAA
CCTAAAGTTG TTGCCTTATT GGTACTAACG GCATTGGTTG GCATGAGTTT ATCTGTTCCT
GGGGCCTTAC CGTGGCAACG GCTAATACCT GCGATGCTTG GTATCGGATT ATTATCTTCT
GCGGCAGCCG CTATTAACCA TATTGTCGAT GAAAAAATTG ATACTGTTAT GGGTAGAACC
CATAACAGAC CTCTGCCTGC AGGTAAAATT AGTGTTACCA ATGCCATTGT ATTTGCCACT
AGCATAGCCT TGCTCGGCTT TATTATTCTT TATGCTTTAG TGAATCCACT GACGGCTTTT
TTGACCTTAG CTGGCTTAGT CGGCTATAGT TTTGTCTATA CCATGTATTT AAAGCGTGCT
ACGCCACAAA ATATTACTAT CGGCGGTTTA GCTGGTGCTA TCCCGCCATT ATTGGGTTGG
ACAGCTATGA CCAATGAAGT GGTACCTAAC GCTTTGTTAT TAGTTTTAAT TATTTTTACT
TGGACACCGC CACACTTCTG GGCATTAGCT ATTCACCGTA AAAATGATTA TGCCAAAGTA
AATATTCCTA TGTTACCGGT AACCCACGGC GTGAGTTTCA CTAAAACACA AATACTGCTC
TATACCGTCT TACTCTTTGT AGTTTGTTTA TTACCTTATT TAGTTGGCAT GAGTAATTGG
TTGTATTTAA TCGGGGCGTG TAGTTTGAAT TTGATCTTTT TTGGCTATGC TTGGCAGCTC
AAGTTTAATG CAAAAGAAGG AACCGCTATG GCAACATTTA AATTTTCCAT CATTCATTTA
ATGTTACTTT TCATTATTTT ACTGCTCGAT CATTATTGGC TACCAATGGG CTAG
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| Protein sequence | MSKVINKTIT PMPSVINTGH HHFSISNIFA NWRAYYDITK PKVVALLVLT ALVGMSLSVP
GALPWQRLIP AMLGIGLLSS AAAAINHIVD EKIDTVMGRT HNRPLPAGKI SVTNAIVFAT
SIALLGFIIL YALVNPLTAF LTLAGLVGYS FVYTMYLKRA TPQNITIGGL AGAIPPLLGW
TAMTNEVVPN ALLLVLIIFT WTPPHFWALA IHRKNDYAKV NIPMLPVTHG VSFTKTQILL
YTVLLFVVCL LPYLVGMSNW LYLIGACSLN LIFFGYAWQL KFNAKEGTAM ATFKFSIIHL
MLLFIILLLD HYWLPMG
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