Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0214 |
Symbol | |
ID | 3522235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 220974 |
End bp | 221630 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637282680 |
Product | TetR family transcriptional regulator |
Protein accession | YP_266981 |
Protein GI | 71281763 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.705047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCC GAGATAAAAT AATCCAAGCC AGTATTGAAT TATTTAATGA GCAAGGAGAG CGTAATGTTA CCACTAACCA TATCGCTGCT CACTTAGCCA TTAGCCCTGG TAATCTGTAT TATCATTTCC GTAATAAAGA AGACATTATT TTATCTATTT ACGAAGAGTA CGCACGTAGC TTGCTATTAG AGACTTTGCC AAAGGTCTCT TCAGAAGTAA AACCATTAGA TTCACTTATT TTGTATATGG ATTCTGTTTT TCAAACGACA ATGAAATTTC GTTTCTTCTA TAGCAATCTA CCTGTGCTAT TGGATAAAAA TCCGATTTTG CGAGAAAAAT ATGTTGAAGT GCAACAGTCC ATTTCAGAAC GCGTTAGTCA ACTTCTTATT TCATTAAGAG CTGCTGATTA TATTGACTTT AATGATGATG AATTGGCTGA TATTGTCAGT ATTTTACGTC TGATTAATAC ATTTTGGGTT AGTTTTCATC AAACTCAGAC CATAGTGAAT GAAGTGAATG ATTCAGTATT CTACCAGGGG GTACTTAAAA TATTAGTTAT CCTACGTCCG TATACTAAAG CACATGCAAT TAGTGAACTT AATCACGCTC GCGATGTGTA CCAGCAAAGA TATCGTGAAG AGGCAGAAAC AGCTTAA
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Protein sequence | MKTRDKIIQA SIELFNEQGE RNVTTNHIAA HLAISPGNLY YHFRNKEDII LSIYEEYARS LLLETLPKVS SEVKPLDSLI LYMDSVFQTT MKFRFFYSNL PVLLDKNPIL REKYVEVQQS ISERVSQLLI SLRAADYIDF NDDELADIVS ILRLINTFWV SFHQTQTIVN EVNDSVFYQG VLKILVILRP YTKAHAISEL NHARDVYQQR YREEAETA
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