| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0177 |
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| Symbol | ubiD |
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| ID | 3518429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 185928 |
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| End bp | 187421 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637282644 |
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| Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
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| Protein accession | YP_266945 |
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| Protein GI | 71278971 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTAACTT ACATGAAATA TAGTGATTTA AGAGACTTTA TTAGTCAGCT TGAAAAAATA
GGCCAACTTA AACGAATTAC TCAGCCTATA TCTACTCATT TAACAATGAC AGAGATCAGT
GACAGAACAC TGAGAGCAAA AGGACCTGCA TTACTTTTTG AAAATGCAGT CAGTGAAAGT
GGCGAACCAT ACAATATGCC AGTCCTAACC AACCTTTTTG GTACCCCTGA CAGAGTTGCT
TTAGCTATGG GGCAAAAGGA TGTTGGTGCT TTACGTGATG TTGGCAAGTT ATTAGCTATG
TTAAAAGAGC CTGAACCACC AAAAGGTTTT CGTGATGCTT TAGGTAAAAT ACCTGTTTAT
AAGCAAGTAT TGAATATGCC GGTGAAAGTG ATTAAAAAAC CATTATGTCA GCAAATTGTG
CTTTCAGGTG ATGACGTCGA TTTGACCAAA ATGCCGATAC AAAGTTGTTG GCCTGGTGAT
GTAGCGCCAC TAATAACTTG GGGACTGACT GTTACGAGAG GTCCACATAA AGAGCGCCAA
AATCTCGGTA TTTATCGTCA ACAAGTGCTT AGTAAAAATA AAGTCATTAT GCGTTGGTTA
TCACATCGTG GCGGTGCCCT TGATTTTCAA GAATTTAAAA AAGAAAATCC AGGTGAAAAA
TACCCTGTTT CCGTTGCTTT AGGTGCAGAT CCTGCCACTA TTTTAGGCGC AGTAACACCG
GTACCAGATA CGCTTTCTGA ATATGCTTTT GCGGGTTTAT TACGTGGAGC CAAAACTGAA
GTGGCTAAAT CAATAAGTAA TGACTTAGAA GTTCCTGCCA CAGCAGAGAT TATTTTGGAA
GGGTATTTAG ATCCTGAAGA AATGGCACCA GAGGGACCTT ATGGTGATCA TACTGGTTAT
TACAATGAAG TAGATAACTT TCCTGTTATG ACAGTAACTC ATATCACTAT GCGAAAAGAT
GCTATTTATC ACAGCACCTA TACCGGCAGA CCGCCTGATG AACCAGCAAT TTTAGGTGTT
GCCCTTAATG AAGTATTTGT TCCTATTCTA CAAAAGCAAT TTCCTGAAAT TCAAGACTTC
TATTTACCGC CAGAAGGTTG CTCTTATCGT CTAGCTGTCG TGACGATTAA AAAGCAATAT
GCGGGTCATG CCAAGCGCGT AATGATGGGC GTATGGTCGT TTTTACGACA ATTCATGTAC
ACCAAGTTTG TGATAGTATG TGACGATGAT ATAAATGCCA GAGACTGGGA AGATGTGATA
TGGGCAATGA CCACACGCAT GGATCCGAGT CGTGATACTG TTTTGATAGA AAACACCCCA
ATTGATTATC TTGATTTTGC ATCACCTGTG TCTGGTTTAG GTTCTAAAAT GGGCATGGAT
GCAACCAACA AATGGCCTGG TGAAACAAAT CGTGAGTGGG GCGAACCCAT TGAGATGACG
CAGGAAATAA AAAACCAAGT TGATGAACTT TGGGATGAAT TAGATATTTT ATAG
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| Protein sequence | MVTYMKYSDL RDFISQLEKI GQLKRITQPI STHLTMTEIS DRTLRAKGPA LLFENAVSES
GEPYNMPVLT NLFGTPDRVA LAMGQKDVGA LRDVGKLLAM LKEPEPPKGF RDALGKIPVY
KQVLNMPVKV IKKPLCQQIV LSGDDVDLTK MPIQSCWPGD VAPLITWGLT VTRGPHKERQ
NLGIYRQQVL SKNKVIMRWL SHRGGALDFQ EFKKENPGEK YPVSVALGAD PATILGAVTP
VPDTLSEYAF AGLLRGAKTE VAKSISNDLE VPATAEIILE GYLDPEEMAP EGPYGDHTGY
YNEVDNFPVM TVTHITMRKD AIYHSTYTGR PPDEPAILGV ALNEVFVPIL QKQFPEIQDF
YLPPEGCSYR LAVVTIKKQY AGHAKRVMMG VWSFLRQFMY TKFVIVCDDD INARDWEDVI
WAMTTRMDPS RDTVLIENTP IDYLDFASPV SGLGSKMGMD ATNKWPGETN REWGEPIEMT
QEIKNQVDEL WDELDIL
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