Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0129 |
Symbol | |
ID | 3522916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 134739 |
End bp | 135827 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637282596 |
Product | extracellular solute-binding protein |
Protein accession | YP_266897 |
Protein GI | 71282442 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.189544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT CAATTTTCGT AAAAGCTGCA CTGGTCGTGT CGCTTGGATT ATCCTCGCTG GGGCTTTCAG CTTTAGCCCA TGCTGACGAT GATAAAAAAT ATCGTTGGAA ATTAGCTGAA ACTTGGGGAC CTAATTTTCC TATTTTTGGT GATGCCACTA AAAATATGGC CAAAATGGTA AAAGAAATGT CGAATGGTCG GTTGACCATA CGCATTGATT CTTCGAATAA GCATAAATCT GCATTAGGTA TTTTTGACTT TGTAAAAAGT GGCCAATATC AAATGGGTCA TTCTGCGTCT TATTATTGGA AAGGTAAAAA CTTCAACACC ATGTTTTTTA CTACCGTACC TTTTGGCATG ATAGCCTCTG AACAACATGC TTGGTTTTAC TACGGTGGTG GCATGGAGTT AATGAAAAAG GTTTATGATC AATATGGCAT CATGTCATTC CCTGGTGGTA ATACGGGTAA CCAAATGGGC GGTTGGTTCA AAAAAGAAAT TAATAGCGTT GAAGATCTGA AAGGTTTGAA AATGCGCATA CCAGGTTTTG CTGGTGAAGT ATTAGCAAAA CTAGGTGCGA AGCCGACAAA CATTCCATCA GGTGAGCTTT ATACGGCATT GGAACGTAAC ACTATTGATG CATTAGAGTG GGTAGGTCCT TCTTTAGATT TACGTATGGG TTTTCATAAA ATAGCGCCTT ATTACTACAC AGGTTGGCAT GAGCCAGGTA CTGAGTTGCA ATTTATGGTC AATCAAAAAG CCTACAATTC CCTACCAAAA GATTTACAAA AAATATTAAC GGTTGCTATG AAAGCTGCAG CTTATGATAT GTATTCGCAA TCGATGCACG CTAGTGGTGT GAACTTAGCA TCACTGAAAA AAGATTACCC AAATGTGCAA ATGCGCTCAT TCCCTAAACC GGTAATGGAA GCGATTGTGC AAGCAAATGA TGAGTTATTA GAAGAGTTTG CTGCTAAAGA TCCTATGACA GCAGAAATTC TTAAGTCACT AAATGATTAT AAGCACCAAA TACGTGCTTG GACTAATTTA TCAGATAGAG CTTATCTGGA TAATTTTGAT GGCAAGTAA
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Protein sequence | MKKSIFVKAA LVVSLGLSSL GLSALAHADD DKKYRWKLAE TWGPNFPIFG DATKNMAKMV KEMSNGRLTI RIDSSNKHKS ALGIFDFVKS GQYQMGHSAS YYWKGKNFNT MFFTTVPFGM IASEQHAWFY YGGGMELMKK VYDQYGIMSF PGGNTGNQMG GWFKKEINSV EDLKGLKMRI PGFAGEVLAK LGAKPTNIPS GELYTALERN TIDALEWVGP SLDLRMGFHK IAPYYYTGWH EPGTELQFMV NQKAYNSLPK DLQKILTVAM KAAAYDMYSQ SMHASGVNLA SLKKDYPNVQ MRSFPKPVME AIVQANDELL EEFAAKDPMT AEILKSLNDY KHQIRAWTNL SDRAYLDNFD GK
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