Gene CPS_0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0128 
Symbol 
ID3519619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp133328 
End bp134467 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content39% 
IMG OID637282595 
Producthypothetical protein 
Protein accessionYP_266896 
Protein GI71277902 
COG category[S] Function unknown 
COG ID[COG3287] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.193314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACTG AGTTATTCAC TTGGCATACA CTAAGCGATA CTTTAAGTGA TTTCAAAAGC 
GGTTTAAGTC TCGCCCAAAA TAGTGGCGCG GAAAGCTTAT TGGTACTTAC GTGCAGCCAA
AACAATTACC CTGAAGAAGA ACTCAACGCT CTATTTCATG CGTGCCCACT AAAGCTCTTT
GGTGGTATTT ACCCAATGCT GACTCTAAAA GGTGACTTAA TTAAACAAGG CGCGTTGATC
ATTGGCTTTA AAGAAGCCGT TGATGTAACT CTGTTCGCTC AACTTAATCA GGTCACGAAT
GAAAGTTGCT TAGAGGAACT CATTACCTCA ACACTAAAAG AAAAGAATAA CTTCTGTGGT
CAGGATGATT TTCTGATGTT CTATGATGCG CTAATCAGCA ACATTGAAGG TTTTATTGAT
TGTCTTTTTG AGCATTTAGA CCACGGGATC AATATCGCTG GTGGTGGTGC CGGCAATTTA
GACTTTATCC AACGCCATTG CATATTTACC AACTCAGGTG TTCATAGCGA TGCTATTCTA
TTAGTCGCAC TACCAAGAAC ACTTAACACC AGTGTGGCGC ATGGTTGGGA GACATTTGAT
GAGCCCTTTT TGGTATCAGA AGCACAAGGG CAAACGGTTC AAAGCTTAAA TTACCAACCT
GCTTATGAAG TTTATTGCCA AACGATTGAA AGTGCCACCG AATACACCTT CAATAATACT
GACTTTTTTG ATATTGCTAA GAATTTTCCA TTAGGTATTA AGGATATCAA TAATAATATA
ATTGTTCGGG ACCCTATTTT AGCGAAAAAT AATCACTTAC AATGTTTTGG CAATATCCCG
ATTAATTCAA TGGTGTATTT ACTTGAAAGC AATATAGATA GCTTAGTGGC CTCGACAGAA
AAAGCAGCGA TCGCCCTACT GTCTAAACTG AACAAGACAA CAATTACAAC AACTATGGTC
TTCGATTGCA TTAGCAGGGC CTTATTTATG GAAGATGAGT TTGAAAAGGA ACTCAATGTC
ATCGCTGAAC ATTGCCATTT AGGTGCATTA TTCGGGGTAC TTTCATTAGG GGAAATAGCC
AATAGTCAAA GTGGTGCTAT TCGTCTTCTC AACAAATCAA TTGTAATAAG CTCTTGGTAG
 
Protein sequence
MATELFTWHT LSDTLSDFKS GLSLAQNSGA ESLLVLTCSQ NNYPEEELNA LFHACPLKLF 
GGIYPMLTLK GDLIKQGALI IGFKEAVDVT LFAQLNQVTN ESCLEELITS TLKEKNNFCG
QDDFLMFYDA LISNIEGFID CLFEHLDHGI NIAGGGAGNL DFIQRHCIFT NSGVHSDAIL
LVALPRTLNT SVAHGWETFD EPFLVSEAQG QTVQSLNYQP AYEVYCQTIE SATEYTFNNT
DFFDIAKNFP LGIKDINNNI IVRDPILAKN NHLQCFGNIP INSMVYLLES NIDSLVASTE
KAAIALLSKL NKTTITTTMV FDCISRALFM EDEFEKELNV IAEHCHLGAL FGVLSLGEIA
NSQSGAIRLL NKSIVISSW