Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0123 |
Symbol | |
ID | 3522107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 128482 |
End bp | 129369 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637282590 |
Product | putative glpG protein |
Protein accession | YP_266891 |
Protein GI | 71281635 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACGC TACAGCCACT GGTTCAACTT AAAGATCATA ATATTGCTTT ATTATTCAGT AACTATTTAC AATCTTTAGG TATTCAAGCA CAACTCAAAT CAAGCCAAGA AGACGGCCAT GTAATTTTAT GCCCTGAAGA TAAAATAGCA CAAGCAAAAG TAGAGTTTGA TGCGTTTATT TTAAAACCCT ATGACGATAA ATATCAACAA GCGGCATGGG ATAGAGGCGA AACAGTCACC TTAAATTCAG GTGATTTCAG CTTATTGAGC AGTTTTAAAG ATAGCTTTAT AGCTCATGCA GGCATTGTTA CTTTACTGGT GTTTGCCCTT TGCTGGTTAG TTTTTATCTT CAGTGAATTG GGTTGGGCAC AACAGATTTT TTATGCCTTA CAGTTCTATC CACAATTATC TATTGATGCT TTATTAGCAG ATCCAGTACG TTTGATTGGC CCTGCATTTT TTCACTTCTC TTGGCTGCAT ATTGTCTTTA ACACCATGTG GTGGTGGCAA TTGGGAGGTA GTATTGAAAA AATATTAGGT AAATCAACAC TCATTAACCT ACTTTTACTC TCTGCTATTG TTTCCAACGT AGGGCAATAT TTAGTGTCAG GTTCAAATTT TGGTGGTTTA TCCGGTGTGG TATATGCGTT GGTTGGTTTT GTTTGGTGGT TTGGTTACTT AGCCCCAGAC AGAGGTTTAT TCCTTGCTAA ACCATTAGTT GGGTTTTTAC TGTTTTGGCT AGTACTGGGT TTTGCTGATT TACTGCCAGT CAATGTAGCC AATACCGCAC ATTTACTCGG CTTGCTCTCG GGATGTTTTC TTGCAGTGTT CACTGTAAAG GTGATTGGCG TAAATAGTAA AAATAACATT AAGAAAGACA GTAAATAA
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Protein sequence | MDTLQPLVQL KDHNIALLFS NYLQSLGIQA QLKSSQEDGH VILCPEDKIA QAKVEFDAFI LKPYDDKYQQ AAWDRGETVT LNSGDFSLLS SFKDSFIAHA GIVTLLVFAL CWLVFIFSEL GWAQQIFYAL QFYPQLSIDA LLADPVRLIG PAFFHFSWLH IVFNTMWWWQ LGGSIEKILG KSTLINLLLL SAIVSNVGQY LVSGSNFGGL SGVVYALVGF VWWFGYLAPD RGLFLAKPLV GFLLFWLVLG FADLLPVNVA NTAHLLGLLS GCFLAVFTVK VIGVNSKNNI KKDSK
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