| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0123 |
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| Symbol | |
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| ID | 3522107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 128482 |
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| End bp | 129369 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637282590 |
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| Product | putative glpG protein |
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| Protein accession | YP_266891 |
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| Protein GI | 71281635 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACGC TACAGCCACT GGTTCAACTT AAAGATCATA ATATTGCTTT ATTATTCAGT
AACTATTTAC AATCTTTAGG TATTCAAGCA CAACTCAAAT CAAGCCAAGA AGACGGCCAT
GTAATTTTAT GCCCTGAAGA TAAAATAGCA CAAGCAAAAG TAGAGTTTGA TGCGTTTATT
TTAAAACCCT ATGACGATAA ATATCAACAA GCGGCATGGG ATAGAGGCGA AACAGTCACC
TTAAATTCAG GTGATTTCAG CTTATTGAGC AGTTTTAAAG ATAGCTTTAT AGCTCATGCA
GGCATTGTTA CTTTACTGGT GTTTGCCCTT TGCTGGTTAG TTTTTATCTT CAGTGAATTG
GGTTGGGCAC AACAGATTTT TTATGCCTTA CAGTTCTATC CACAATTATC TATTGATGCT
TTATTAGCAG ATCCAGTACG TTTGATTGGC CCTGCATTTT TTCACTTCTC TTGGCTGCAT
ATTGTCTTTA ACACCATGTG GTGGTGGCAA TTGGGAGGTA GTATTGAAAA AATATTAGGT
AAATCAACAC TCATTAACCT ACTTTTACTC TCTGCTATTG TTTCCAACGT AGGGCAATAT
TTAGTGTCAG GTTCAAATTT TGGTGGTTTA TCCGGTGTGG TATATGCGTT GGTTGGTTTT
GTTTGGTGGT TTGGTTACTT AGCCCCAGAC AGAGGTTTAT TCCTTGCTAA ACCATTAGTT
GGGTTTTTAC TGTTTTGGCT AGTACTGGGT TTTGCTGATT TACTGCCAGT CAATGTAGCC
AATACCGCAC ATTTACTCGG CTTGCTCTCG GGATGTTTTC TTGCAGTGTT CACTGTAAAG
GTGATTGGCG TAAATAGTAA AAATAACATT AAGAAAGACA GTAAATAA
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| Protein sequence | MDTLQPLVQL KDHNIALLFS NYLQSLGIQA QLKSSQEDGH VILCPEDKIA QAKVEFDAFI
LKPYDDKYQQ AAWDRGETVT LNSGDFSLLS SFKDSFIAHA GIVTLLVFAL CWLVFIFSEL
GWAQQIFYAL QFYPQLSIDA LLADPVRLIG PAFFHFSWLH IVFNTMWWWQ LGGSIEKILG
KSTLINLLLL SAIVSNVGQY LVSGSNFGGL SGVVYALVGF VWWFGYLAPD RGLFLAKPLV
GFLLFWLVLG FADLLPVNVA NTAHLLGLLS GCFLAVFTVK VIGVNSKNNI KKDSK
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