| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0121 |
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| Symbol | tdh |
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| ID | 3522837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 126942 |
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| End bp | 127967 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637282588 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_266889 |
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| Protein GI | 71282364 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCTT TAGCTAAATT AAAAGCAGAA CCGGGCATTT GGTTAACGCG AACCGAAAAA
CCAAAACTAG GTCATAATGA TCTGCTAATC AAAATTAAAA AAACGGCCAT TTGTGGTACA
GATATCCACA TTTATAATTG GGATGAATGG GCACAAAAAA CAGTGCCTAC GCCTATGGTT
GTTGGACATG AGTACGCAGG TGAAGTGGTT GGTATCGGCC AAGAAGTTAA AGGCTTTACT
TTAGGTGACC GGGTTTCTGG TGAAGGCCAT ATTACTTGTG GTCATTGCCG TAATTGTCGT
GGTGGCAGAA CTCATTTATG TCGTAATACC GTTGGTGTTG GGGTCAATCG TGCGGGGTCA
TTTGCAGAGT ATCTAGTGAT ACCTGCATAC AATGCCTTTA AATTACCTGA CGAAATTTCT
GATGATTTAG CGTCAATTTT TGACCCCTTT GGTAATGCAG TTCATACCGC ATTGTCATTT
GATTTAGTGG GTGAGGATGT ATTAATCACC GGTGCTGGCC CTATTGGTAT TATGGCTGCA
GCCGTTGCTA AACATGTAGG TGCTCGTCAT GTCGTTATTA CCGATATTAA CGAATATCGT
CTTGACCTTG CAAGAAAAAT GGGCGCTACT CGTGCTGTTG ATGTGAGTAA AGAAAGCTTA
AAAGATGTCA TGACCGATTT GGGGATGACC GAGGGTTTTG ATGTTGGTAT GGAAATGTCA
GGTGTTCCAA TGGCATTCAC TAGCATGTTA GAAAGCATGA ATAATGGTGG TAAAATTGCC
ATGCTGGGTA TTCCTGGTAG CGATATGGCT ATTGATTGGA GCCAAGTTAT TTTTAAAGGG
CTTACCATTA AAGGTATTTA TGGTCGTGAA ATGTTCGAAA CTTGGTATAA GATGGCAAGT
TTGATTCAAT CTGGTTTAGA TCTCACCCCG ATTATTACCC ATCACTACAA TATCGATGAC
TTTCAGCAAG GCTTTGATAT GATGCGTTCT GGTCAATCTG GCAAGGTCAT TTTAGATTGG
ACTTAA
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| Protein sequence | MKSLAKLKAE PGIWLTRTEK PKLGHNDLLI KIKKTAICGT DIHIYNWDEW AQKTVPTPMV
VGHEYAGEVV GIGQEVKGFT LGDRVSGEGH ITCGHCRNCR GGRTHLCRNT VGVGVNRAGS
FAEYLVIPAY NAFKLPDEIS DDLASIFDPF GNAVHTALSF DLVGEDVLIT GAGPIGIMAA
AVAKHVGARH VVITDINEYR LDLARKMGAT RAVDVSKESL KDVMTDLGMT EGFDVGMEMS
GVPMAFTSML ESMNNGGKIA MLGIPGSDMA IDWSQVIFKG LTIKGIYGRE MFETWYKMAS
LIQSGLDLTP IITHHYNIDD FQQGFDMMRS GQSGKVILDW T
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