Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0118 |
Symbol | kdtA |
ID | 3520081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 123639 |
End bp | 124994 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637282585 |
Product | 3-deoxy-D-manno-octulosonic-acid transferase |
Protein accession | YP_266886 |
Protein GI | 71279622 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGATATG TTTTAGCTTT ATTTTTTTAC CGTGTATTCC TTTTATTGCT CACCCCAATA GTTTTACTTG TGCTATTAAT CCGCTCATTT AATCACCCTG AATACCGCCA ACGTTTATTT GAACGCTTAG GCTTTTTTCC TAAGCCCTAT AAGCAAGGTG GTATTGTTGT GCATGCTGCC AGTGTCGGTG AAGTCATCGC ACTAAAAAGT TTTATCGAAA AATTATTAGT AAACTATCCA GATTTACCCA TCACCATCAC TTCATTTACC CCGACTGGCT CTGCGCAAAT AACCAAACTC TTTGGTCGAC GTGTTCAGCA TGGTTATTTA CCGTTAGATA TATTTCCCTG CACAACATTA TTTCTACATC GGCTTAAACC TAAAATGATA ATTTTCATGG AAACCGAGTT ATGGCCTAAC TTAATTGCTC AATGCGACCA ACACCAGATT AAATTATTGC TAATTAACGG CCGCTTATCT AAAAAATCCT TAACCAGTTA TCAAAAACTT AGTGCGCTTA TGGCGCCCTG CTTAAATCGC TTTGATATGA TCCTCACGCA AAGCCAAGAA AATTTAACTC ACTTTTTGCA GCTCGGTGCG CATCAAAGCC GTTGTGTGAA TAGTGGCAAT TTAAAATTCG ATATCAGTGT CAATGAACAA GTTATCAATA AAAAGGCCGA GTTAGCCAAG TTACTTTTTG CTGATGATAG TCAGGCCAAA AGAACAGTCT GGTTAGTTGC CAGTACACAC GAGGGCGATG AAGCCATTAC CTTAACCGCC TTTAAAGAAT TGTTATCTCA ATATCCATCA TTGTTATTAG TGCTAGTACC GCGCCATCCA GAACGTTTTG AGCAAGTCGC CAATCTTTGC CTTACAAAAC AATTATCACT GGCTAAACGC AGTGAAAATA CGATAATTAA TAATGAGCAA GTGTGGTTGC TGGATAGCCT TGGCGAGTTA ATGGCTGCCT TTGCTTTAAG TGATATTGTC ACTATGGGTG GTAGTTTCAG TGAAGTGGGT GGTCATAACC CGTTAGAACC AGCATTATTT AATAAGCCTG TTATTGTTGG TCACAACATG AGCAACTTCA ACGAAATAAT GCAGCAGCTA AGACAAGAAA ATGCCATTAT TGAACTTACT AACAATACAC CGACTAATGA ATCTAGCGCA CAACTTGTCA ATGAAGTTAG CGCATTATTG CAACAACCAA CTCGGCAGAA AACGCTTGGC GAAAATGCGC TTAAAGTGGT ACTAAAAAAC CAAGGAGCCA GTGAAAAAAC GTTGGCTCAA GTAGTAAACC TTCTGCCCAC TAGGGTTAAT ATTACCAGCA CTACACCATT AGGAGATAAC TCGTGA
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Protein sequence | MRYVLALFFY RVFLLLLTPI VLLVLLIRSF NHPEYRQRLF ERLGFFPKPY KQGGIVVHAA SVGEVIALKS FIEKLLVNYP DLPITITSFT PTGSAQITKL FGRRVQHGYL PLDIFPCTTL FLHRLKPKMI IFMETELWPN LIAQCDQHQI KLLLINGRLS KKSLTSYQKL SALMAPCLNR FDMILTQSQE NLTHFLQLGA HQSRCVNSGN LKFDISVNEQ VINKKAELAK LLFADDSQAK RTVWLVASTH EGDEAITLTA FKELLSQYPS LLLVLVPRHP ERFEQVANLC LTKQLSLAKR SENTIINNEQ VWLLDSLGEL MAAFALSDIV TMGGSFSEVG GHNPLEPALF NKPVIVGHNM SNFNEIMQQL RQENAIIELT NNTPTNESSA QLVNEVSALL QQPTRQKTLG ENALKVVLKN QGASEKTLAQ VVNLLPTRVN ITSTTPLGDN S
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