| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0098 |
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| Symbol | mmsA1 |
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| ID | 3519515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 104755 |
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| End bp | 106251 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637282565 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_266866 |
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| Protein GI | 71277993 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAG TAAATGTAAT AGGCCATTTA ATCAATGGTG AAATGGTTAA TGATGATGTG
CGCACACAAG CAGTCTTTAA TCCTGCTACC GGCGCTGCAG AAAAGAAAGT CGCTTTAGCG
TCAAAGCAAA CGGTTGAACA GGCCATTTCA GCGGCTCAGA CAGCCTTCCC CGCATGGCGT
AATACCCCGG CAATAAAGCG CGCACGGGTG ATGTTTCGTT TCAAAGAATT ATTAGAACAA
CATGCCGATA CTATCTGTCG ACTCATTGGT GAAGAGCACG GAAAAATATC ACACGATGCT
GCCGGTGAAT TACAACGCGG TATTGAAAAC GTTGAGTACG CCTGTGGTGC ACCTGAGTTA
CTCAAAGGCG AGCACAGCAA AAACGTTGGC CCAAACATTG ATTGTTGGAG TGAGTTTCAA
CCGTTAGGTG TTGTTGCCGG TATTACCCCG TTTAACTTCC CTGCCATGGT TCCTATGTGG
ATGTTCCCAT TGGCAATCGT GTGCGGTAAT TGTTTTATCT TAAAACCATC AGAGCGTGAC
CCAAGTTCAA CCTTGTATAT CGCCCAGTTA TTAAAAGAAG CAGGCTTACC TGATGGCGTA
ATGAACGTCG TAAACGGTGA TAAAGAAGCG GTCGATGTGT TATTAAGTGA CGAGCGCATT
AAAGCAGTGA GTTTTGTTGG CTCAACACCC ATTGCTGAGT ACATTTACGC CACCGCTAAT
GCCAATGGCA AACGCTGTCA GGCACTGGGC GGCGCTAAAA ATCACGCCAT CATTATGCCC
GACGCTGACA TGGACAATGC GGTCAATCAA CTACTTGGTG CTGCCTTTGG CTCATCAGGA
GAGCGCTGCA TGGCGTTATC TGTTGCGGTT GCTGTCGGTG ATGAAGCGGC TGATGCCTTA
GTAGAGAAAA TGACAGAAGC GATGAAAAAC TTAAGTGTTG GCGCTCATGA CAAGGCCAGT
AATGATTTTG GTCCGGTCAT TACGCAAGCG CATAAAGACA AAGTCGAAGG CTATATCACC
AGCGCCCAAA ATCAGGGAGC AACCATTGTT GTCGATGGTC GCCAACCACA CGTTGAAGGT
TATGAAAATG GCTTCTTCGT TGGCGCCACC TTAATTGACG GTGTTACTGC TGACATGGAC
AGTTACGTTG CTGAAATCTT TGGTCCGGTA TTACAAGTGA TGCGCGTTAA AACCATGCAA
GAAGCAATGC AGTTAATTAA CGACCATGAA TACGGCAATG GTACCTGTAT CTTTACCCGT
GATGGAGAAG CAGCGCGTTA TTTCTCAGAT AACATTCAGG TCGGTATGGT AGGCATTAAT
GTGCCACTAC CCGTGCCTGT TGCTTATCAT AGTTTCGGGG GCTGGAAGCG CTCATTATTT
GGTGACTTAC ATGCTTATGG CCCAGATGGC GTTCGTTTTT ATACCAAACG TAAAACCATC
ACGCAACGCT GGCCTTCAAG TGGCGTGCGT GAAGGCGCAA GTTTTGCATT TGCTTAG
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| Protein sequence | MNEVNVIGHL INGEMVNDDV RTQAVFNPAT GAAEKKVALA SKQTVEQAIS AAQTAFPAWR
NTPAIKRARV MFRFKELLEQ HADTICRLIG EEHGKISHDA AGELQRGIEN VEYACGAPEL
LKGEHSKNVG PNIDCWSEFQ PLGVVAGITP FNFPAMVPMW MFPLAIVCGN CFILKPSERD
PSSTLYIAQL LKEAGLPDGV MNVVNGDKEA VDVLLSDERI KAVSFVGSTP IAEYIYATAN
ANGKRCQALG GAKNHAIIMP DADMDNAVNQ LLGAAFGSSG ERCMALSVAV AVGDEAADAL
VEKMTEAMKN LSVGAHDKAS NDFGPVITQA HKDKVEGYIT SAQNQGATIV VDGRQPHVEG
YENGFFVGAT LIDGVTADMD SYVAEIFGPV LQVMRVKTMQ EAMQLINDHE YGNGTCIFTR
DGEAARYFSD NIQVGMVGIN VPLPVPVAYH SFGGWKRSLF GDLHAYGPDG VRFYTKRKTI
TQRWPSSGVR EGASFAFA
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