Gene CPS_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0086 
Symbol 
ID3518413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp89242 
End bp91413 
Gene Length2172 bp 
Protein Length723 aa 
Translation table11 
GC content39% 
IMG OID637282553 
Productprolyl endopeptidase 
Protein accessionYP_266854 
Protein GI71277809 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1505] Serine proteases of the peptidase family S9A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAC AAAGCCTTTT CTTGACCAGT ATCTTGGTCA CTAGCGTATT AGCCGGTTGT 
ACTGGTAACA GTGTTGAGCA AACATCAGAT AAAGTTGCTG CTGCACAAAA ACAGACACAA
AAAATCAGTT ATCCTGTGAC AAAAAAAGGT GACGTGGTTG ATACCTTTTT TGGTACTGAT
GTTGCAGACC CATACCGATG GTTAGAAGAT GATCGCAGTG AAGAAACAGG CGCTTGGGTT
AAGGCAGAAA ACAAAGTGAC ATTCGATTAC TTGTCACAAA TTCCATACCG TGGACAACTT
AAGTCTCGTT TAGCTGAATT ATGGAACTAC GAAAAAGTAG GCGCACCTTT TAAAAAGGGT
GATTATTCCT ATTTTTACAA AAATGATGGT CTGCAAAACC AATATGTCGT TTATCGTCAA
AAAGAGGGCG GCACTGCTGA ATTGTTTTTA GATCCAAACA CCTTTAGTGA AGATGGCACC
ACCTCAATGG GACAGTTAAG CTTCTCAAAA GATGGCTCTA TTGCCGCTTA TGCTATTTCT
GAAGGTGGAA GTGATTGGCG TAAAATCATC ATTATTGATG TAGAAACCAA AAAAGTACTA
GAGACTCCTC TGATTGATGT TAAATTCTCA GATATTTCTT GGTTTAAAAA TGAAGGGTTT
TATTACTCAA GTTATGACAA ACCAGAAGGT AGTGAATTGT CGGCTAAGAC TGACCAACAT
AAACTTTATT ACCATGTATT AGGTCAGCCA CAAAAAGAAG ATAAAGTTAT TTTTGGTAAT
ACCGCTGAAC AAAAGCGTCG TTATGTTGGT GGTACCGTTA CCGATGATAA TCGCTTCTTA
CTTATTTCAG GTGCAATTTC AACGTCAGGT AACGATCTTT ACCTGAAAGA TTTAACCAAA
CCAAATAGCC CATTACTCAC CATTACTGAT AACTTTGATG CTGATACCTA CGTCATTGAA
AATGAAGGCG ATAAATTATT TTTAGTTACT AACTTAGGTG CACCAAATAA GAAAATAGTC
ACGGTAAATG CTAAAGCACC AGCCAGTAAA AACTGGACTG ATTTTATTGC TGAAACAGAT
TATGTTTTAA GCGCTTCAAC GGGTGGTGGT TTCTTCTTTA CTGAGTATAT GGTTGATGCC
ATTTCTAAAG TTTATCAATA TGATTATCAA GGTAAGCAAG TACGTGAAAT CAACTTGCCA
GGTGTTGGTA GTGCTTCTGC CTTAGAAGGC GATAAAGACG AAAGTACTTT ATATTACTCA
TTTAGCAACT ACAAAACGCC AGGTACTATC TATAGCTACA ACATAGATAA AGGTAATAGT
GACGTTTACC GTAAATCTGG CGCTAAATTC GATAGCGATG CTTATGAATC AAAGCAAGTA
TTCTATCCTT CAAAAGATGG CACCAAAGTA CCTATGATCA TTACCTATAA AAAGGGTATT
GAGCTTAATG GTAAAAATCC AACTATTTTG TATGGTTACG GCGGCTTCAA TATTAGCTTA
ACCCCACGAT TTAGTGTTTC ACGTGCAGTA TGGCTAGAAC AAGGCGGTAT TTATGCTGTT
GCTAACTTAC GTGGTGGCGG TGAATACGGT AAAACATGGC ACAAAGCCGG CACTCAATTA
GATAAACAAA ATGTTTTTGA TGACTTTATT GCTGCCGGTG AATACTTAAT TAAGCAAGAT
TATACTTCTA GCGACTACTT GGCGATTAAT GGCGGTTCTA ACGGTGGTTT ATTAGTAGGT
GCTGTTATGA CTCAGCGTCC TGATCTTATG CAAGTTGCCT TACCCGCTGT TGGTGTATTA
GATATGCTTA GATACCATAC CTTCACTGCT GGTGCAGGCT GGGCGTACGA CTACGGTACG
GCTGAGCAAA GTGAAGAAAT GTTCACTTAC TTAAAAGGTT ATTCACCTGT TCATAATGTT
AAAGCCGGTG TAAGTTATCC TGCGACTATG GTCACTACCG GTGATCATGA TGACCGTGTT
GTGCCAGCAC ATTCATTTAA GTTTGCTGCT GAATTACAAG CTAAACAAGC AGGTAACGCG
CCTACATTAA TTCGTATTGA AACCAATGCA GGTCACGGCG CAGGTACGCC AGTTTCTAAA
ACTATTGAAC AGTACGCTGA CATCTATGCC TTTACCTTGT TTAACATGGG TTTTACTGCA
TTACCTAAGT AG
 
Protein sequence
MKKQSLFLTS ILVTSVLAGC TGNSVEQTSD KVAAAQKQTQ KISYPVTKKG DVVDTFFGTD 
VADPYRWLED DRSEETGAWV KAENKVTFDY LSQIPYRGQL KSRLAELWNY EKVGAPFKKG
DYSYFYKNDG LQNQYVVYRQ KEGGTAELFL DPNTFSEDGT TSMGQLSFSK DGSIAAYAIS
EGGSDWRKII IIDVETKKVL ETPLIDVKFS DISWFKNEGF YYSSYDKPEG SELSAKTDQH
KLYYHVLGQP QKEDKVIFGN TAEQKRRYVG GTVTDDNRFL LISGAISTSG NDLYLKDLTK
PNSPLLTITD NFDADTYVIE NEGDKLFLVT NLGAPNKKIV TVNAKAPASK NWTDFIAETD
YVLSASTGGG FFFTEYMVDA ISKVYQYDYQ GKQVREINLP GVGSASALEG DKDESTLYYS
FSNYKTPGTI YSYNIDKGNS DVYRKSGAKF DSDAYESKQV FYPSKDGTKV PMIITYKKGI
ELNGKNPTIL YGYGGFNISL TPRFSVSRAV WLEQGGIYAV ANLRGGGEYG KTWHKAGTQL
DKQNVFDDFI AAGEYLIKQD YTSSDYLAIN GGSNGGLLVG AVMTQRPDLM QVALPAVGVL
DMLRYHTFTA GAGWAYDYGT AEQSEEMFTY LKGYSPVHNV KAGVSYPATM VTTGDHDDRV
VPAHSFKFAA ELQAKQAGNA PTLIRIETNA GHGAGTPVSK TIEQYADIYA FTLFNMGFTA
LPK