Gene CPS_0083 details

Gene Information

• Locus tag: CPS_0083
• Symbol: recQ
• ID: 3522689
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 86632
• End bp: 88479
• Gene Length: 1848 bp
• Protein Length: 615 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637282550
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_266851
• Protein GI: 71282216
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAATTCCT CCGTTGCCAA TGCCCAAACC AGTGCAGAAA TCAGTACAGA ACTGAGTGCA 
GAAAATAATG CCTTATTACT CGATACCTTA AAGCATTATT TTGGCTATGA GAGCTTTCGT 
GAGGGACAAG CTAAAATTAT CAATAGCTTG TTGCAAGGGC AGGACTCCTT AGTCTTAATG 
CCTACCGGTG GTGGTAAATC TTTATGCTAT CAGCTACCCG CGGTACTGTT ACCCGGTGTT 
ACTGTTGTTG TATCGCCGCT GATTGCCTTA ATGAAAGACC AAGTAGATGG CTTAACTAGG 
CAAGGGATCT CCGCTGCCTT TATTAATTCA AGTTTGGAAC AAAGCGAAAT CAGTGATATT 
TTCGCTCGAT TGGGACGAGG TGAAATTAAA TTGCTGTATG TTGCCCCTGA GCGCCTCACT 
AATTATTACT TCTTACAAAG TTTGAACCAA CTGCCATTGA GCTTATTTGC TATTGATGAA 
GCACACTGTA TTTCTCAATG GGGTCATGAT TTCAGACCCG CGTACACCAA GCTACAGTGC 
TTAAAACAAA ATTTTCCCAC AGTGCCCGTT ATGGCGTTAA CTGCAACGGC AGATGTGACT 
ACTCGTAAAG ATATTTTGAA CCAACTTGCG CTGCCAAATC CTTATATTCA TCTTGATAGT 
TTTGACCGGC CCAATATTCG TTTTACGCTA GCGCCTAAAT ATAATGGCGA AAAGCAATTG 
TTGGGTTATA TCAAAAAGAA GGGTGAAGAT AGCGGTATTA TTTATTGTAA CAGCCGCTGG 
CAAGTAGAAA AACTAGCTAA GTATTTAGCT GCCAGTGGCA TAAACTGCGC TGCTTACCAT 
GCAGGACTAG AAAACGAAAT TCGTTCTCTA GTACAAGAAG GGTTCACCAA AGATAATATT 
CAAATAGTGA TCGCTACCGT TGCTTTTGGT TTAGGTATCA ATAAACCTAA TGTGCGTTAT 
GTGATACATT TTGAGCCACC TCGTACTTTA GAGTCTTATT ATCAAGAGAT TGGCCGTGCG 
GGTCGTGACG GTTTAAATGC AGAAGCGCTA TTTTTGGTTG ATGATAAAGA TGTCGCGCGT 
ATTAAAAAAC GTATTAGTGA AGGCGATAAT CCGCAGCGAG TGAATGTTGA AATGCAACGT 
TTTGCTGCCA TGGATGCCTT TATTGATGCG CAAACGTGTC GTCGGCAGGT GGTACTGAAT 
TACTTTGCCG AATATACCGA AAAAGGCTGT GGAAATTGCG ATATTTGCTT AGACCCACCA 
AGTCAGTTTG ATGGCACCAT AGAAGCACAA AAAGTACTGT CATGCGTGTA CCGTGTGGAG 
CAACAAGGTG ATATTAATCA TGTTATTGCA GTCTTGCGCG GTGAACTCAC TGAAAAAGTT 
AAGCAGCTAG CGCATGATAA AGTCTCTACT TTTGGTATAG GTAAAGGAAA AACGGTGGGT 
TACTGGTTCT CAATTATTGG CCAACTAATT CACTTAGGTT ATTTACAGCA AGATATCGAA 
CAACAATCTA TTTTATGCTT AACACAAGCG TCGGGCGTGG TATTAAAAGC GCAAGAGCCT 
TTGATGTTAG CAAGCCCGCG TCTGCAAAAA GCCAGTTACT GGCAAGAAAA AAGCCCACAA 
AAAAGTTATG ACCGTGTGTT ATTTGCAAAA TTACGCGAAC TTCGTAAAGC CATTGCTGAT 
GGCGAAGATA TCGCACCTTT TATTGTCTTT AATGATGCTA CCTTGTCTGA ACTGGCACGT 
ATAAAGCCAA AAACATCGCG TGAAATGCTC AGCATTAGTG GTATCGGAGA CGTGAAGTTA 
TCCCGTTACG GACAACCCTT TCTCGCGTTA ATCAAAGAGC ATAAGTAA 

 

Protein sequence

MNSSVANAQT SAEISTELSA ENNALLLDTL KHYFGYESFR EGQAKIINSL LQGQDSLVLM 
PTGGGKSLCY QLPAVLLPGV TVVVSPLIAL MKDQVDGLTR QGISAAFINS SLEQSEISDI 
FARLGRGEIK LLYVAPERLT NYYFLQSLNQ LPLSLFAIDE AHCISQWGHD FRPAYTKLQC 
LKQNFPTVPV MALTATADVT TRKDILNQLA LPNPYIHLDS FDRPNIRFTL APKYNGEKQL 
LGYIKKKGED SGIIYCNSRW QVEKLAKYLA ASGINCAAYH AGLENEIRSL VQEGFTKDNI 
QIVIATVAFG LGINKPNVRY VIHFEPPRTL ESYYQEIGRA GRDGLNAEAL FLVDDKDVAR 
IKKRISEGDN PQRVNVEMQR FAAMDAFIDA QTCRRQVVLN YFAEYTEKGC GNCDICLDPP 
SQFDGTIEAQ KVLSCVYRVE QQGDINHVIA VLRGELTEKV KQLAHDKVST FGIGKGKTVG 
YWFSIIGQLI HLGYLQQDIE QQSILCLTQA SGVVLKAQEP LMLASPRLQK ASYWQEKSPQ 
KSYDRVLFAK LRELRKAIAD GEDIAPFIVF NDATLSELAR IKPKTSREML SISGIGDVKL 
SRYGQPFLAL IKEHK