| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0079 |
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| Symbol | |
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| ID | 3522996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 80867 |
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| End bp | 81640 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637282546 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein |
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| Protein accession | YP_266847 |
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| Protein GI | 71282521 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTTT ACCGACGTTT AACCGCGATT AAAGCCATTA GTTTTGATTT AGATGACACC
TTGTATAATA ACCGACCAAT AATGCAGTCG GTTGAACAGC AAATGGCGCA TTACTTTACT
GAAAAGTTTG CCATTTTATT ACCTGAGCTA CTCGTTGAAC CAAAGCAGGT CTTTAATCGA
CGTTTTTGGG CACCGTATCG ACAACAAGCG ATAAAAGCAC ATCAGGATAT TTCTCACGAT
GTGGTAAGAC TGCGTTTTGA AAGTTATCGT TTAGGTTTGC TGGCGCATAA TCTCTCTGCA
GAAGCAGCGA GAAAAGAAGC ACAAGCGGGC TTAGATTATT TCATTAACTT ACGAAGTGAT
TTTACCGTAC CCAAAGAAAG CCATGAACTC TTAGCGAGTT TAAGTAAAGC GTTTCCGTTG
GTCTCAATCA GTAATGGTAA TGTAGACACC AGAGCCCTGG GCATTGATCA TTATTTTCAA
CATATTTATC ATGCCGGTTT TCAAACAGGC AATTGTCATG ATGAAAGTGA ACATTTGCTA
AAACAAAAAC CTGAAACCGA TATGTTTTCC TTAGTTTGTC AGCAACTCGA TATTTTACCT
GAACAGTTAT TACATGTCGG AGATTGTGGT TTTGCCGATA TTCATGGTGC ATTAAATGCC
GGTTGCCAAA CTGCTTGGTT ACCGCAATAC GGTGTGGGTA AAAGCCTACA GCAAATACCT
CATATTGAAT TAAGCCTAGT AAGCGACCTG TCACAACTAA TTCGAAAAGC TTAA
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| Protein sequence | MQFYRRLTAI KAISFDLDDT LYNNRPIMQS VEQQMAHYFT EKFAILLPEL LVEPKQVFNR
RFWAPYRQQA IKAHQDISHD VVRLRFESYR LGLLAHNLSA EAARKEAQAG LDYFINLRSD
FTVPKESHEL LASLSKAFPL VSISNGNVDT RALGIDHYFQ HIYHAGFQTG NCHDESEHLL
KQKPETDMFS LVCQQLDILP EQLLHVGDCG FADIHGALNA GCQTAWLPQY GVGKSLQQIP
HIELSLVSDL SQLIRKA
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