Gene CPS_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0073 
SymbolhemD 
ID3520357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp76642 
End bp77403 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content40% 
IMG OID637282540 
Producturoporphyrinogen-III synthase 
Protein accessionYP_266841 
Protein GI71279895 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGTAA AACCACTTAA GGTCCTAATT ACTCGACCTA AAGCTAAAGC TCAGCAACTC 
GCCTTGTTAC TCAATCAACA AGGCATACTT AATACCAGCC AAACCTTATT TGATTATCAA
AAGAATGCTA GCGCTAACGA CATAGCTACC GCGCTAGAAA ACGCAGATAT ATTGATCTTT
GTTAGTGTTG CTGCCGTTGA ATTTGCTCAC GCCAGCTATC CTCTACCTAA CAACTTATCT
CAAACCATTT TTGCTGTCGG TAATGCCACC AAAAAAGCAT TACAAGCAAT AGGCATGACC
ACCATTTTAT CACCACCTCC ACAGCAAGAG CACAGTGAGG GTTTACTTAA ACTGCCACAA
TTGTCTAAAG TTATAGGTAA AAGGATAATA ATCTTTCGTG GCAATGGTGG ACGAGAGCAC
ATTGCTAACA GCTTAACGCT ACGTGGTGCT GAGGTTCGAT ATATCGAAAG TTACCAACGT
GTATGGCGAA CATTACCAAT AATTATTGCT GAGCAATGGC GAGCACAAAA AATTAACTGT
ATTGTCGTTA CCAGTAACGA TATATTATTA GCATTACTAA AGTACCTAGC CAGTACAACA
AATAGCACAG ATAATTATTG GCAATCTCAA TGTTTGTGGG TTGTGGTCAG TGATCGCATT
GAAAAAAATG CCAAAGCCTT AGGCTTAAAA CGGGTCATTA ATACCCATGG CGCCAGCTCT
CAAATACTCT GTAATACGTT ACAAGCACTC TCTTGTTCGT AA
 
Protein sequence
MPVKPLKVLI TRPKAKAQQL ALLLNQQGIL NTSQTLFDYQ KNASANDIAT ALENADILIF 
VSVAAVEFAH ASYPLPNNLS QTIFAVGNAT KKALQAIGMT TILSPPPQQE HSEGLLKLPQ
LSKVIGKRII IFRGNGGREH IANSLTLRGA EVRYIESYQR VWRTLPIIIA EQWRAQKINC
IVVTSNDILL ALLKYLASTT NSTDNYWQSQ CLWVVVSDRI EKNAKALGLK RVINTHGASS
QILCNTLQAL SCS