Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0071 |
Symbol | hemY |
ID | 3519278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 73992 |
End bp | 75203 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637282538 |
Product | hemY protein |
Protein accession | YP_266839 |
Protein GI | 71279232 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG3071] Uncharacterized enzyme of heme biosynthesis |
TIGRFAM ID | [TIGR00540] hemY protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCCGCA TTATCATTGC CTTAATCATC TTTTTCAGTG TGATGGCAAT AAGCCCTTTT TTAATCGATG AAAAAGGTTA CATTCTTATT GCTATGGGTA ACACCACCAT TGAGTTAACC GTATTATCAG CTGGTATTAT GTTAACGCTA CTCTTTATTG CGCTAGTTAT TAGTTTAAAA CTATTACGCG GTGGTTTAAA TATTAGCTTT GGTACCTGGA ATAAGCTTGC TTTTGCCGGA CAACGTCGTG GCATTGCCAA CTTCAATAAG GGTCTTGCCG CGTATATGTT AGAGGATTAT AGCCAAGCAG AAGCGTTATT TGCTAAAAGT GCTATTCCAT CTAAAAGAAA ACAAAGCGCT TACCTACTTG CTGCCTCGGC ATCTGCAAAG TTAGACTTAA ATAGTAATAC CAATCACTAT TTAGCATTAC TTGAAAAAGA AACCGTTAAA CTCAAAGACG TTGGTTTAGA AAGTGTCATT GTTAATATTA AATTGTTAAT GAACCAAGAT AAAACTGAAA CCTACGCTAA AGCCCGTGCG CTAATTGATG AAAACCACAA ACAAATTGGC CATGACGCCC GCTTATTGGC ACTTGAAATT GATTTATGCA TCATAGAGCA ACGCTTTGCA CAAGCCGTGC AATACATAGC AGCGGCGCGT AAAGAAAAGA CAATTCTGGA TGAAACGGTT CAAACGTGGG AGCAACTCGC CTATTACGGT AGCTTTAATG AAAGCATCAA ACAGCATGAT AGCGAAGTAC TGCACGATAA TTGGAATGGT CTGAGCCGTA AGGTTAAACA ACGAGAAGCG GTGTTATTTG CTTACTGTAA AGTATTAACC GAAAACGAAA TCACCGAGCC GTTAAATAAG TTATTAGTAC CGCTTTTTAA AAAATCACCC AGTGGCGACT TTTTAAAACA AATTCGTAAT TTACCTATTA AGCGCGCCGA TGAGTTAATT GCGATAGTTC AGAAGCAACT CCATAAGAAT ATCCATAGTG GTAAATGGTT GAGTTGTTTA GGTCATTTAG CCATGAAAAG TGAACAATAT TCTATGGCAG AAAAAGCTTT TGGTAGCCTA TTAAAACTAG AAGATACCGA ATATGGTACG CAATATGACC GTCAGGATTT ACAAGCGTTT GCACAAGTCC ATAGTAAACA AGGGCAATTT CAAGCGGCTG ATGCCCTGTG GTCAAAAGCA AACTCTCTAT AA
|
Protein sequence | MIRIIIALII FFSVMAISPF LIDEKGYILI AMGNTTIELT VLSAGIMLTL LFIALVISLK LLRGGLNISF GTWNKLAFAG QRRGIANFNK GLAAYMLEDY SQAEALFAKS AIPSKRKQSA YLLAASASAK LDLNSNTNHY LALLEKETVK LKDVGLESVI VNIKLLMNQD KTETYAKARA LIDENHKQIG HDARLLALEI DLCIIEQRFA QAVQYIAAAR KEKTILDETV QTWEQLAYYG SFNESIKQHD SEVLHDNWNG LSRKVKQREA VLFAYCKVLT ENEITEPLNK LLVPLFKKSP SGDFLKQIRN LPIKRADELI AIVQKQLHKN IHSGKWLSCL GHLAMKSEQY SMAEKAFGSL LKLEDTEYGT QYDRQDLQAF AQVHSKQGQF QAADALWSKA NSL
|
| |