Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0067 |
Symbol | |
ID | 3521750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 65523 |
End bp | 67703 |
Gene Length | 2181 bp |
Protein Length | 726 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637282534 |
Product | TonB-dependent receptor |
Protein accession | YP_266835 |
Protein GI | 71281279 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTTCT CCAAATCTGC TACCTGTTTA GCTATCACTG CAAGTCTATT TAACGTTACC GCTTCAGCTG AACAGCAAGC GAATAATGAC ACCAGCAATA CCGGCAATAC CGGCAATACC GGCAATCTTG AAACTATCAC GGTCACCAGT GATTTTCGCC AGCAAAACTT ACAAAATACT CCAGCTTCTT TATCGGTTTT AACCGATATT GAAATTAATC AACGAAATGC ACGTCATCTC GAAGAATTAG TTGCTGTTAG CCCTAATGTT AACTTTGCCA GTGGCTCACA GCGAGCACGT TATTATCAAA TTCGTGGCAT TGGTGAACGT AGTCAATTTC AAGAGCCGAT CAACCCCTCT GTAGGTATGA TTATTGACGA TATCGACTTT ACTGGTATTG GCAGCATCGC TAATTTATTT GATGTGAAGC AAGCTGAAAT TTTTCGAGGT CCTCAAGGCA CACGTTTTGG TGCTAACGCA ATTGCAGGCA TGATCAATAT TACCACCAAT GAACCCACAG AAGATTTTGA AGGTGCTGTT CAACTGGGTG TTGGTAATTA TAATTCTTAC GATATGGGTG TTGCCTTATC TGGACCTGCA AGTGATACAG TGAATTATCG TCTAGCCGTC AACCAACATA ACAGTGACGG TTTTACCGAA AATATCCATT TACAACGAGA TGATACCAAC AATCGTGATG AATTAAGCGT ACGTGGCAAG TTAGCCATAG AAGCAAGTAA TGATCTAACC ATTGACCTTG CTGGATTCTA TTTCGATTTT GATAATGGCT ATGATGTATT TTCTTTAGAT AACACCAGAG AAACCTATTC AGACCAACCT GGTTTTGACC AACAAGAAAC AGCTGCCTTT TCAGCAAAAT TTACCTATAC AGGTTTTGAA AGCGCCACCC TATTAGCCAT TGTCAGCCAT TCAGATACAG ATTTAGGCTA TGGTTACGAT GAAGATTGGG CCTTTGGCGA ATATGAGTGG CGCAGTGATG ACCCTGTTTA TACTCCAGAC CCATGCATTA CCCCATCTGG CTGTTTAGCT GATTTTGATG GCTACTCATC TACTGACCAT TATTACCGTG ATAAAACCGT ATTAACGACT GAGTTACGTG CGGTTTCTAA CCAAGGCCAA GAAATTTTTA ATGGCAGTAC TGCTTGGGTT GCAGGCGTTT ACTTTAAACA AGACGATGAA GACCTTTTAC GCCAATACAC TTATGCTAGC GGTGACTTTA CTTCAATTAA CGAAAGCACG AGTGTAGCGT TGTATGGTCA ATTAGATACT CAAATTGCTG AAAAATGGTC GTTAATGTCA GGCTTACGCA TTGAAAATCG CAGTGCTGAC TATAACAATT CAGATTTATT TGATGACAGG ATCGACGATA CAATGGTGGG TGGTAAGTTA GTACTTAGTT ACCAGCAAAA TGAAGACAGT ATGTGGTACG GATCAATTAA CCGAGGCTAT AAAGCGGGTG GGCATAATAC CGATGGTACT TTACCTGAAG ATTTACGTAC TTTTGACCCT GAGTATTTAT TGAATTATGA AATCGGCTAC AAAGTTTCTT TACTCGAGAA CAGTGCTTAT GTTCGAACTT CGGTTTTCTA TATGGATCGC GAAGACATGC AAGTTAAGAG TTCTAAAACC ATAATACGTG AAGATGGTAG CTCTGAATTT ATTAGCTATT TAGGTAACGC CGCTACGGGT AGTAACTATG GTGTTGAAAT TGAAGGTGCT TGGTATATAA ATGACTTAAT AAACGTGTAC GGGTCACTCG GTTTACTTGA TACAGAGTTC AATGATTTTG TTAATGCTGA TGGTGTTTCA TTAAGCGGGC GTGAACAGGC CCATGCGCCA AATTATCAAT TTAACGTCGG CATAAATGTT CAACCTACTG ACCATTGGTT AATTAACTTG TCAGTTGATG GTAAAGATAG TTTTTACTTT TCCGATAGCC ATGACGAGCA ATCAGAATCC GTTGCACTAT TAAATGCCTC AGTCGCTTAT ATACAAGATA ATTGGCAGAT AAAGATTTGG GGTCGTAACT TAGCAAATGA AGACTACGCA AATCGAGGTT TTTACTTTGG TAATGACCCT CGTGATGGCT ATACTGCAAA ACAATACACG CAGCTTTCAG AGCCATTAGT CTTCGGCGCT ACGCTAGATT ATCAATTCTA A
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Protein sequence | MTFSKSATCL AITASLFNVT ASAEQQANND TSNTGNTGNT GNLETITVTS DFRQQNLQNT PASLSVLTDI EINQRNARHL EELVAVSPNV NFASGSQRAR YYQIRGIGER SQFQEPINPS VGMIIDDIDF TGIGSIANLF DVKQAEIFRG PQGTRFGANA IAGMINITTN EPTEDFEGAV QLGVGNYNSY DMGVALSGPA SDTVNYRLAV NQHNSDGFTE NIHLQRDDTN NRDELSVRGK LAIEASNDLT IDLAGFYFDF DNGYDVFSLD NTRETYSDQP GFDQQETAAF SAKFTYTGFE SATLLAIVSH SDTDLGYGYD EDWAFGEYEW RSDDPVYTPD PCITPSGCLA DFDGYSSTDH YYRDKTVLTT ELRAVSNQGQ EIFNGSTAWV AGVYFKQDDE DLLRQYTYAS GDFTSINEST SVALYGQLDT QIAEKWSLMS GLRIENRSAD YNNSDLFDDR IDDTMVGGKL VLSYQQNEDS MWYGSINRGY KAGGHNTDGT LPEDLRTFDP EYLLNYEIGY KVSLLENSAY VRTSVFYMDR EDMQVKSSKT IIREDGSSEF ISYLGNAATG SNYGVEIEGA WYINDLINVY GSLGLLDTEF NDFVNADGVS LSGREQAHAP NYQFNVGINV QPTDHWLINL SVDGKDSFYF SDSHDEQSES VALLNASVAY IQDNWQIKIW GRNLANEDYA NRGFYFGNDP RDGYTAKQYT QLSEPLVFGA TLDYQF
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