| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0062 |
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| Symbol | atpD |
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| ID | 3520888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 61562 |
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| End bp | 62947 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637282529 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_266830 |
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| Protein GI | 71280422 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAG GTAAAGTCGT CCAAATAATT GGCGCAGTTG TGGATGTAGA ATTTCCACAA
GATGCCGTAC CTCAGGTATA TGACGCATTA AAGATAACTG AAGGTGACCT TGAAGGTTTA
GTACTTGAAG TGCAACAGCA GCTTGGTGGC GGCGTTGTGC GTACTATCGC AATGGGTACA
TCTGACGGTT TGCGTCGTGG TCTGAATGTA GTAAATACAG GTCAAGGAAT CCAAGTACCA
GTTGGTGTTG AGACTTTAGG TCGCATCATG AACGTACTGG GTGAGCCAAT TGATGAAGCT
GGCCCTATCG GCGAAAAAGA CCGTTGGTCT ATTCACCGTG AAGCACCTGC TTATGCTGAA
CAATCAATGT CTAACGAATT GTTAGAAACT GGTATCAAAG TAATCGATTT AGTTTGTCCA
TTCGCTAAGG GTGGTAAAGT TGGTCTTTTC GGTGGTGCTG GTGTTGGTAA AACAGTAAAC
ATGATGGAAC TTATCCGTAA CATCGCAATC GAGCACAGTG GTTACTCAGT ATTTGCTGGT
GTTGGTGAGC GTACACGTGA AGGTAACGAT TTCTATCACG AAATGAATGA TTCTAATGTA
CTTGATAAAG TATCATTAGT TTACGGCCAA ATGAACGAGC CTCCAGGAAA CCGTTTACGT
GTTGCCTTTA CTGGTTTAAC TATGGCTGAG AAATTCCGTG ACGAAGGTCG TGACGTATTA
TTCTTTGTTG ATAATATCTA TCGTTATACT CTTGCGGGTA CTGAAGTTTC TGCACTTCTT
GGACGTATGC CATCAGCGGT TGGTTATCAA CCAACACTTG CTGAAGAAAT GGGTGTATTA
CAAGAACGTA TTACTTCAAC TAACAAAGGT TCAATCACTT CAATCCAAGC GGTATACGTA
CCAGCAGATG ATTTAACTGA CCCTAGCCCT GCAACTACTT TTGCTCACTT AGATGCAACT
GTTGTATTAA GTCGTGATAT TGCTTCGCAA GGTATTTATC CTGCGATTGA CCCACTAGAT
TCATCTTCAC GTCAACTAGA TCCATTAGTA GTTGGTACTG AACATTATGA AACTGCTCGT
GGCGTTCAAA CAGTATTACA ACGTTACAAA GAACTTAAAG ATATCATCGC CATCTTAGGT
ATGGATGAGT TATCTGAAGA AGATAAGCAA ACTGTATCTC GTGCACGTAA GATTCAGCGT
TACTTATCTC AGCCGTTCTT CGTTGCTGAA GTATTTACTG GTTCTCCTGG TAAATATGTA
TCATTAAAAG ACACCATTGC TGGCTTTAAA GGCATTTTAG CTGGTGAATA CGATGATATG
CCTGAGCAAG CGTTCTACAT GGTTGGTGGT ATTGAAGAAG CCATCGAGAA AGCGAACAAG
ATGTAA
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| Protein sequence | MSTGKVVQII GAVVDVEFPQ DAVPQVYDAL KITEGDLEGL VLEVQQQLGG GVVRTIAMGT
SDGLRRGLNV VNTGQGIQVP VGVETLGRIM NVLGEPIDEA GPIGEKDRWS IHREAPAYAE
QSMSNELLET GIKVIDLVCP FAKGGKVGLF GGAGVGKTVN MMELIRNIAI EHSGYSVFAG
VGERTREGND FYHEMNDSNV LDKVSLVYGQ MNEPPGNRLR VAFTGLTMAE KFRDEGRDVL
FFVDNIYRYT LAGTEVSALL GRMPSAVGYQ PTLAEEMGVL QERITSTNKG SITSIQAVYV
PADDLTDPSP ATTFAHLDAT VVLSRDIASQ GIYPAIDPLD SSSRQLDPLV VGTEHYETAR
GVQTVLQRYK ELKDIIAILG MDELSEEDKQ TVSRARKIQR YLSQPFFVAE VFTGSPGKYV
SLKDTIAGFK GILAGEYDDM PEQAFYMVGG IEEAIEKANK M
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