Gene CPS_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0022 
Symbol 
ID3518639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp26651 
End bp27802 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content40% 
IMG OID637282489 
Productputative DNA processing protein DprA 
Protein accessionYP_266804 
Protein GI71277761 
COG category[L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 
TIGRFAM ID[TIGR00732] DNA protecting protein DprA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATA ACAGTAAAAG TAATATTGAA TACTGGTTAG CTTTAAAGTT TGTTCCTCGA 
TTAGCCATTC ACAAAAAAAT AGCGCTTGTT GAGACCTTTG GTTTGATAGC GTTGTTTTCG
TTAGACAATA AACCCTCAGT ACTTAGCTCA GCTAATAACT TAAGTGTGAA ACAACTTCAC
GCTTTTCATC AGCCTGATTG GCAAACAATA ACTCATATTA TCCATGCAAG TGCTGCATGT
AATAGTGCCA TCATTTGCTA TGACGATACT TATTACCCTC AATTGCTCAA ACAAATCTAT
GATCCACCCT TAGTGATATT TATGCAGGGC AATCCATTAT TACTTAATGC TCCGCAGGTG
GCCGTAGTTG GAAGTAGAGC TGCTAGCGTA GGAGGTAGAG ATACCGCATT CAAAATATGC
CAACAACTTG CGCAGCATAA TTTTATTATT ACAAGTGGGT TAGCCCTTGG TATCGATGCT
GCAGCGCATA GAGGTGCCCT TAGTGAGCCT GCTAGCACAA TCGCGGTAGT TGCTACGGGT
TTAGATCAGG TATACCCAGC CAGACATCAT TCTTTGGCGC AGAAAATTAT AGATTCAAGC
GGCGCCATCA TTAGTGAATT TGTACCTGGA ACGCAAGCTA GGGCGGGGCA TTTTCCAAAA
AGAAATCGCC TTATTAGTGG TTTAAGTTTG GGGGTTTTAG TCGTTGAAGC TGAATTAAAA
AGTGGCTCTT TGATAACAGC TCGTTGTGCA CTAGAGCAAA ATAGAGACGT TTTTGCTATA
CCTAGCTCTA TTGAAAATAA ACAAGCAAAA GGCTGTCACT GGTTAATTAA ACAAGGCGCT
AAACTTGTAG AACAATGTGC CGATATAATA GATGAGTTCG CTTTTGCAGA TAAACCTAGT
CTACACTTAA AGAGTGAGTT GAAGCCTTTG AAGTCAGCTA CACATAGTAC TCACAAAGGA
GGCGATGAAA TAAATCAAAA AGTCTTGTGT AACGATGCGT TGTTGGATAG TGTGGGATTT
GAAATTACTC CCGTAGATAA AGTAGTTTTA CGGAGCGAAC TTCCCGTAGA GGAAGTGTTA
ACTAGATTAA CAATGCTGGA GCTAAATGGT CTGGTATCTG CGGTACCTGG TGGCTATATT
AGAACGCAAT AA
 
Protein sequence
MINNSKSNIE YWLALKFVPR LAIHKKIALV ETFGLIALFS LDNKPSVLSS ANNLSVKQLH 
AFHQPDWQTI THIIHASAAC NSAIICYDDT YYPQLLKQIY DPPLVIFMQG NPLLLNAPQV
AVVGSRAASV GGRDTAFKIC QQLAQHNFII TSGLALGIDA AAHRGALSEP ASTIAVVATG
LDQVYPARHH SLAQKIIDSS GAIISEFVPG TQARAGHFPK RNRLISGLSL GVLVVEAELK
SGSLITARCA LEQNRDVFAI PSSIENKQAK GCHWLIKQGA KLVEQCADII DEFAFADKPS
LHLKSELKPL KSATHSTHKG GDEINQKVLC NDALLDSVGF EITPVDKVVL RSELPVEEVL
TRLTMLELNG LVSAVPGGYI RTQ