| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0009 |
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| Symbol | lepB1 |
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| ID | 3518775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 10789 |
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| End bp | 11481 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637282476 |
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| Product | signal peptidase I |
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| Protein accession | YP_266791 |
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| Protein GI | 71278597 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0681] Signal peptidase I |
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| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.407191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCAACT TTAGTAATAA AAAATTCATT TCTTTTTTAC ATAGTAACAA AAAATTCCTT
ATTTTCATCT TGTTGATGTC CGTTTTTCGA AGCGCGGTTG CCGACTGGTA CTCTGTGCCC
ACAGGTTCAA TGAAACCGAC TATTCAGGAA GGCGACCGTA TTATTGTTAA TAAAATAGCC
TATGACGTTC GCTTACCTTT TACCGATGTA TCACTACTAT CAATTACTAC GCCTAAACGC
GGTGAGATTG TTGTGTTTGA ATCTAAAGCT GCAGAGTTAA GATTAGTTAA ACGTGTCATT
GGTTTACCTG GCGATGTCGT TGAAATGAAT AATGAAGTTA TTAAGGTTAA CGGAAAACCT
TTGTCCTACA AAATAGTAGA TAAGCTGATT AACAAAACTA ATTCCCAAAA CATCACAACC
TCGATAGAAA AAATAGGAAA TGTTGAACAC CACATTAATA TCAATAATAC CGCAAGTAAC
CGGCTCAGTA ATTTTCTACC TGTAACCGTT CCTTCGGGTC ATTATTTAGT ATTAGGTGAT
AACCGCCGAC ACAGTGCAGA TTCACGTGTT TATGGCTTTG TCCCTCACCA AGAGTTACGA
GGAAAGGCCA CTGCAATTGC TTTTTCTATT GATTACAATA ATTATTATAT CCCTCGCTCG
GACCGATTAC TCCAAGATAT TTATGGTATT TAG
|
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| Protein sequence | MTNFSNKKFI SFLHSNKKFL IFILLMSVFR SAVADWYSVP TGSMKPTIQE GDRIIVNKIA
YDVRLPFTDV SLLSITTPKR GEIVVFESKA AELRLVKRVI GLPGDVVEMN NEVIKVNGKP
LSYKIVDKLI NKTNSQNITT SIEKIGNVEH HININNTASN RLSNFLPVTV PSGHYLVLGD
NRRHSADSRV YGFVPHQELR GKATAIAFSI DYNNYYIPRS DRLLQDIYGI
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