Gene CPS_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0006 
SymbolglyS 
ID3521637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp7323 
End bp9389 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content38% 
IMG OID637282473 
Productglycyl-tRNA synthetase subunit beta 
Protein accessionYP_266788 
Protein GI71281166 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0751] Glycyl-tRNA synthetase, beta subunit 
TIGRFAM ID[TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACTG AAACACTCCT TATTGAGCTT GGTACAGAAG AGTTACCACC TAAATCATTA 
AAAACATTAG CGACTGCTTT TTATGACAAC ATCAAGGGTC AACTTGATAG TCATAACTTA
TCGTATAGCG ATATTAAATG GTTTGCTACA CCTCGTCGAT TTGCTGTTCA AGTTTTTGAT
TTAGTTGAAA AACAGGATGA TAAAATCGTA GAGAAACGCG GTCCAGCAGT GAATGTAGCA
TTTGATGATG CTGGCAATGC TAGCAAAGCT GCACAAGGTT GGGCTCGGTC GAATGGCATA
GAGGTTGATC AAGCAGAGCG TTTAGTTACC GGCAAGGGCG AATGGTTACT TCATCGTGCC
ACAGTATCAG GTAAAGCTGT CGTTGAACTA ATACCGGACA TGGTAACGAC GGCATTAAAT
AAACTGCCAA TTGCTAAACC TATGCGTTGG GGAGCTGAAC GAACTCAGTT TATTCGCCCA
GTACAAACGT TAACCATGCT TTTTGGTAGC GATATTATTG CAGGAGAGGC CCTTGGGGTT
AGCTCAAGTA ATCAAGTACA AGGGCATCGT TTTCATCATG AAGGTTTAGT GACTATTAAT
CATGCTAATG ATTACCAAGC CGAATTAGCA AAAGCTTACG TAGAAGTAGA CTTTAATGAA
AGACAAAACA AAATTGTTGC TCAAATAAAA CAAGTTGCTA ATGATATTGA CGCTGTTGCC
TTAATTGATG AAGAGTTACT TAACGAAGTA ACGGCATTAG TTGAGTGGCC AGTGACTTTA
GTTGGGACTT TTGATGAAGA TTTCCTAAAT GTGCCAGCAG AGCCGTTAAT ATACTCGATG
AAAGATCATC AAAAGTATTT CCCGGTCACA GATAAAAATG GTCAATTAGT TAATAAGTTT
ATCTTTGTTA CTAATATAGA ATCTAAAGAT CCGAATACGA TTATTTTTGG TAATGAAAAA
GTCATTCGTC CTCGTTTAGC CGATGCTGAG TTTTTCTTTA AAACGGATAA AAAACAGAGT
TTAGAATCAA GATTAAAAAG TCTTGAGTCA GTGTTATTTC AAAAGCAGCT AGGTACATTG
AAGGCTAAGT CTGAGCGAAT TGCTTCATTA TCTCAATTCA TCGCTGAACA ATTAAACGAG
AATGCACAAG ATGCTTATCG TGCAGGTTTA CTTAGTAAAA CTGATTTAAT GTCAGATATG
GTATTAGAAT TCCCACAAGT GCAAGGCACT ATGGGTAAGT ATTACGCATT ACATGATGGT
GAAAATGAAA ACATTGCACA AGCATTGGAA GATCAATATC GTCCACGTTT TGCCGGTGAT
TCTTTACCAG AAGCTAATAT TGGTTGTGCA GTAGCTATTA GTGACAAAAT TGATAGCTTA
GTGGGTATCT TTGGTATTAA TCAAGCCCCT AAGGGTGATA AAGACCCGTT TGCTTTACGA
AGAGCTGCCA TTGGTAGTAT TCGTATAATC ATTGAAAAAC AGCTCGATTT AGACCTATCC
ACTTTGATTA ATAAAAGTAT TGAATTATTT GGCGATAAAT TAGTAAACGA AAATACCGCC
ACTGATGTAC TTGAATTTAT TATGGGTCGT TTCCGTGCTT TTTATCAAGA ACAAGGTATT
AGCGTTGATG TTATCCAAGC GGTATTGGCT AAGAAGCCGA GTGCACCACT TGACTTTGAA
AAGCGCATTA AAGCAGTAAC TTTCTTTGGT GAGTTACCTG AGGCTGCAAC ACTTGCTGCT
GCTAATAAGC GTGTTGGAAA TATATTGGCT AAATTCGATG GTGAACTTTA CCAGTCGTTT
AATACTGATT TAGCAACAGA GCAAGCGGAA CGTGATTTAG CTGATATCTA TCGAGATATA
AGCTTGAAAG TTGCGCCGTT AATGGCTGAT AAGAATTACC AAGCCGCTCT TTCTGAATTA
GCTCAGCTTA AAGCTCCTAT AGATACCTTC TTTGATGGTG TCATGGTGAT GAGCGATGAT
GAAGCAGTTA AAATAAACCG TTTAACCTTA CTCAATCAAA TTAGAAATAG CTTCTTTGCA
ATCGCAGATA TATCTGTCTT GCAGTAA
 
Protein sequence
MTTETLLIEL GTEELPPKSL KTLATAFYDN IKGQLDSHNL SYSDIKWFAT PRRFAVQVFD 
LVEKQDDKIV EKRGPAVNVA FDDAGNASKA AQGWARSNGI EVDQAERLVT GKGEWLLHRA
TVSGKAVVEL IPDMVTTALN KLPIAKPMRW GAERTQFIRP VQTLTMLFGS DIIAGEALGV
SSSNQVQGHR FHHEGLVTIN HANDYQAELA KAYVEVDFNE RQNKIVAQIK QVANDIDAVA
LIDEELLNEV TALVEWPVTL VGTFDEDFLN VPAEPLIYSM KDHQKYFPVT DKNGQLVNKF
IFVTNIESKD PNTIIFGNEK VIRPRLADAE FFFKTDKKQS LESRLKSLES VLFQKQLGTL
KAKSERIASL SQFIAEQLNE NAQDAYRAGL LSKTDLMSDM VLEFPQVQGT MGKYYALHDG
ENENIAQALE DQYRPRFAGD SLPEANIGCA VAISDKIDSL VGIFGINQAP KGDKDPFALR
RAAIGSIRII IEKQLDLDLS TLINKSIELF GDKLVNENTA TDVLEFIMGR FRAFYQEQGI
SVDVIQAVLA KKPSAPLDFE KRIKAVTFFG ELPEAATLAA ANKRVGNILA KFDGELYQSF
NTDLATEQAE RDLADIYRDI SLKVAPLMAD KNYQAALSEL AQLKAPIDTF FDGVMVMSDD
EAVKINRLTL LNQIRNSFFA IADISVLQ