Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0006 |
Symbol | glyS |
ID | 3521637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 7323 |
End bp | 9389 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637282473 |
Product | glycyl-tRNA synthetase subunit beta |
Protein accession | YP_266788 |
Protein GI | 71281166 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACTG AAACACTCCT TATTGAGCTT GGTACAGAAG AGTTACCACC TAAATCATTA AAAACATTAG CGACTGCTTT TTATGACAAC ATCAAGGGTC AACTTGATAG TCATAACTTA TCGTATAGCG ATATTAAATG GTTTGCTACA CCTCGTCGAT TTGCTGTTCA AGTTTTTGAT TTAGTTGAAA AACAGGATGA TAAAATCGTA GAGAAACGCG GTCCAGCAGT GAATGTAGCA TTTGATGATG CTGGCAATGC TAGCAAAGCT GCACAAGGTT GGGCTCGGTC GAATGGCATA GAGGTTGATC AAGCAGAGCG TTTAGTTACC GGCAAGGGCG AATGGTTACT TCATCGTGCC ACAGTATCAG GTAAAGCTGT CGTTGAACTA ATACCGGACA TGGTAACGAC GGCATTAAAT AAACTGCCAA TTGCTAAACC TATGCGTTGG GGAGCTGAAC GAACTCAGTT TATTCGCCCA GTACAAACGT TAACCATGCT TTTTGGTAGC GATATTATTG CAGGAGAGGC CCTTGGGGTT AGCTCAAGTA ATCAAGTACA AGGGCATCGT TTTCATCATG AAGGTTTAGT GACTATTAAT CATGCTAATG ATTACCAAGC CGAATTAGCA AAAGCTTACG TAGAAGTAGA CTTTAATGAA AGACAAAACA AAATTGTTGC TCAAATAAAA CAAGTTGCTA ATGATATTGA CGCTGTTGCC TTAATTGATG AAGAGTTACT TAACGAAGTA ACGGCATTAG TTGAGTGGCC AGTGACTTTA GTTGGGACTT TTGATGAAGA TTTCCTAAAT GTGCCAGCAG AGCCGTTAAT ATACTCGATG AAAGATCATC AAAAGTATTT CCCGGTCACA GATAAAAATG GTCAATTAGT TAATAAGTTT ATCTTTGTTA CTAATATAGA ATCTAAAGAT CCGAATACGA TTATTTTTGG TAATGAAAAA GTCATTCGTC CTCGTTTAGC CGATGCTGAG TTTTTCTTTA AAACGGATAA AAAACAGAGT TTAGAATCAA GATTAAAAAG TCTTGAGTCA GTGTTATTTC AAAAGCAGCT AGGTACATTG AAGGCTAAGT CTGAGCGAAT TGCTTCATTA TCTCAATTCA TCGCTGAACA ATTAAACGAG AATGCACAAG ATGCTTATCG TGCAGGTTTA CTTAGTAAAA CTGATTTAAT GTCAGATATG GTATTAGAAT TCCCACAAGT GCAAGGCACT ATGGGTAAGT ATTACGCATT ACATGATGGT GAAAATGAAA ACATTGCACA AGCATTGGAA GATCAATATC GTCCACGTTT TGCCGGTGAT TCTTTACCAG AAGCTAATAT TGGTTGTGCA GTAGCTATTA GTGACAAAAT TGATAGCTTA GTGGGTATCT TTGGTATTAA TCAAGCCCCT AAGGGTGATA AAGACCCGTT TGCTTTACGA AGAGCTGCCA TTGGTAGTAT TCGTATAATC ATTGAAAAAC AGCTCGATTT AGACCTATCC ACTTTGATTA ATAAAAGTAT TGAATTATTT GGCGATAAAT TAGTAAACGA AAATACCGCC ACTGATGTAC TTGAATTTAT TATGGGTCGT TTCCGTGCTT TTTATCAAGA ACAAGGTATT AGCGTTGATG TTATCCAAGC GGTATTGGCT AAGAAGCCGA GTGCACCACT TGACTTTGAA AAGCGCATTA AAGCAGTAAC TTTCTTTGGT GAGTTACCTG AGGCTGCAAC ACTTGCTGCT GCTAATAAGC GTGTTGGAAA TATATTGGCT AAATTCGATG GTGAACTTTA CCAGTCGTTT AATACTGATT TAGCAACAGA GCAAGCGGAA CGTGATTTAG CTGATATCTA TCGAGATATA AGCTTGAAAG TTGCGCCGTT AATGGCTGAT AAGAATTACC AAGCCGCTCT TTCTGAATTA GCTCAGCTTA AAGCTCCTAT AGATACCTTC TTTGATGGTG TCATGGTGAT GAGCGATGAT GAAGCAGTTA AAATAAACCG TTTAACCTTA CTCAATCAAA TTAGAAATAG CTTCTTTGCA ATCGCAGATA TATCTGTCTT GCAGTAA
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Protein sequence | MTTETLLIEL GTEELPPKSL KTLATAFYDN IKGQLDSHNL SYSDIKWFAT PRRFAVQVFD LVEKQDDKIV EKRGPAVNVA FDDAGNASKA AQGWARSNGI EVDQAERLVT GKGEWLLHRA TVSGKAVVEL IPDMVTTALN KLPIAKPMRW GAERTQFIRP VQTLTMLFGS DIIAGEALGV SSSNQVQGHR FHHEGLVTIN HANDYQAELA KAYVEVDFNE RQNKIVAQIK QVANDIDAVA LIDEELLNEV TALVEWPVTL VGTFDEDFLN VPAEPLIYSM KDHQKYFPVT DKNGQLVNKF IFVTNIESKD PNTIIFGNEK VIRPRLADAE FFFKTDKKQS LESRLKSLES VLFQKQLGTL KAKSERIASL SQFIAEQLNE NAQDAYRAGL LSKTDLMSDM VLEFPQVQGT MGKYYALHDG ENENIAQALE DQYRPRFAGD SLPEANIGCA VAISDKIDSL VGIFGINQAP KGDKDPFALR RAAIGSIRII IEKQLDLDLS TLINKSIELF GDKLVNENTA TDVLEFIMGR FRAFYQEQGI SVDVIQAVLA KKPSAPLDFE KRIKAVTFFG ELPEAATLAA ANKRVGNILA KFDGELYQSF NTDLATEQAE RDLADIYRDI SLKVAPLMAD KNYQAALSEL AQLKAPIDTF FDGVMVMSDD EAVKINRLTL LNQIRNSFFA IADISVLQ
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