Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCE_4249 |
Symbol | dxs |
ID | 2751831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus ATCC 10987 |
Kingdom | Bacteria |
Replicon accession | NC_003909 |
Strand | - |
Start bp | 3961959 |
End bp | 3963851 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637281046 |
Product | 1-deoxy-D-xylulose-5-phosphate synthase |
Protein accession | NP_980542 |
Protein GI | 42783295 |
COG category | [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism |
COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000543695 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATCTAA CGCAAATTCA AAACCCTAGT TTTTTGAAAG ATATGTCTAT CAGTGAACTA GAGGGATTGA GTGAGGATAT TCGTAAGTTT TTAATTGAAG AGCTCTCTCA AACAGGTGGA CATATTGCGC CTAATTTAGG TGTAGTAGAA CTCACAATTG CTCTGCATAA ATTATTTGAT AGTCCGAAAG ATAAATTTTT ATGGGATGTA GGACATCAAT CCTATGTACA TAAAATTTTA ACTGGACGTG CAAAAGAATT CGGCACATTA AGGCAATATC AAGGTCTATG TGGTTTCCCA AAACGTTGTG AGAGTGAGCA CGATGTATGG GAAACTGGCC ATAGCTCGAC ATCATTATCT GCTGCAATGG GAATGGCTCT AGCACGTGAT TTAAAGAAAA CGAAAGAATA TGTTATACCA ATCATTGGTG ATGGTGCTTT AACGGGCGGA ATGGCTTTAG AGGCATTGAA CCATATTGGA CATGAAAAAA CAGACATGAT TGTTATTTTG AATGATAATG AAATGTCAAT TGCGCCAAAC GTTGGTGCGC TTCATAATGT GCTTGGACGT CTACGTACCG CAGGAAAATA CCATTGGGTA AAAGACGAGC TAGAGTATAT TTTGAAGAAA ATCCCAGCTG TCGGTGGGAA AGTTGCTGCG ACAGCAGAGA AAATAAAAGA TAGTCTTAAA TATTTACTAG TATCCGGTGT CTTTTTCGAA GAGTTAGGCT TTACATATTT AGGTCCAGTC GATGGACATG ATTATGAAAA GTTATTCGAA ACGTTGCAAT ATGCAAAGAA AACAAAAGGC CCAGTGCTTG TTCATGTTAT TACGAAAAAA GGAAAAGGTT ACAAACCAGC AGAGAGTGAT GTTATTGGCA CTTGGCATGG AACAGGACCT TATAAAATTG AATCAGGTGA CTTCGTTAAA CCGAAAGAAG TTGCACCAGC ATGGAGTGCT GTTGTTAGTG AAACAGTACT TAAGTTAGCG AGAACGGATG AGCGTATCGT TGCAATTACA CCTGCAATGC CTGTTGGATC GAAACTTGAG AAATTCCAAA AAGAATTCCC AGATCGTATG ATTGATGTAG GTATTGCAGA ACAGCATGCT ACAACAATGG CAGCGGGTAT GGCAACGCAA GGTATGAAAC CATTCTTAGC GATTTATTCA ACATTTTTAC AAAGAGCATA TGACCAAGTT GTTCATGATA TATGCCGCCA AAATTTAAAT GTTTTCATCG GAATCGACCG CTCTGGTTTA GTAGGAGCAG ATGGTGAAAC GCATCAAGGT GTATTTGATA TTTCATTCTT ACGCCACTTG CCGAATATGG TACTTATGAT GCCAAAAGAT GAAAATGAAG GGCAACATTT AGTATACACG GCAATGCAAT ATGAAGATGG ACCAATCGCA TTACGTTATG CGCGAGGTAA TGGACTTGGC GTTCATATGG ATGAAGAATT AAAGGCGATT CCAATCGGTT CATGGGAAAC GTTAAAAGAA GGTACACAAG CAGCTATTTT AACATTTGGT ACGACAATAC CAATGGCAAT GGAAGCGGCT GAGCGTCTTG AAAAGGCTGG AGTTTCAGTG AAAGTAGTGA ACGCTCGCTT CATTAAACCA ATGGATGAAG CATATTTACA TGATCTCTTA GGAAAAAATA TACCAATTTT AACGATTGAA GAAGCTTGCT TAATTGGTGG TTTTGGAACA GGAGTAGTTG AATTTGCGTC TGAGAACGGG TACCATAGTG CGTTAGTTGA ACGAATGGGT ATTCCAGATC GTTTCATAGA GCACGGTAGT GTAACAAAAT TATTAGAAGA AATCGGTTTA ACGACAGATG CTGTTGTAGA CCGTATTCAT ACAATGATTC CATCAAAACA AAAAAGGGCG TAA
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Protein sequence | MDLTQIQNPS FLKDMSISEL EGLSEDIRKF LIEELSQTGG HIAPNLGVVE LTIALHKLFD SPKDKFLWDV GHQSYVHKIL TGRAKEFGTL RQYQGLCGFP KRCESEHDVW ETGHSSTSLS AAMGMALARD LKKTKEYVIP IIGDGALTGG MALEALNHIG HEKTDMIVIL NDNEMSIAPN VGALHNVLGR LRTAGKYHWV KDELEYILKK IPAVGGKVAA TAEKIKDSLK YLLVSGVFFE ELGFTYLGPV DGHDYEKLFE TLQYAKKTKG PVLVHVITKK GKGYKPAESD VIGTWHGTGP YKIESGDFVK PKEVAPAWSA VVSETVLKLA RTDERIVAIT PAMPVGSKLE KFQKEFPDRM IDVGIAEQHA TTMAAGMATQ GMKPFLAIYS TFLQRAYDQV VHDICRQNLN VFIGIDRSGL VGADGETHQG VFDISFLRHL PNMVLMMPKD ENEGQHLVYT AMQYEDGPIA LRYARGNGLG VHMDEELKAI PIGSWETLKE GTQAAILTFG TTIPMAMEAA ERLEKAGVSV KVVNARFIKP MDEAYLHDLL GKNIPILTIE EACLIGGFGT GVVEFASENG YHSALVERMG IPDRFIEHGS VTKLLEEIGL TTDAVVDRIH TMIPSKQKRA
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