Gene BCE_4179 details

Gene Information

• Locus tag: BCE_4179
• Symbol: ribD
• ID: 2748694
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cereus ATCC 10987
• Kingdom: Bacteria
• Replicon accession: NC_003909
• Strand: +
• Start bp: 3898275
• End bp: 3899387
• Gene Length: 1113 bp
• Protein Length: 370 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637280976
• Product: riboflavin biosynthesis protein RibD
• Protein accession: NP_980472
• Protein GI: 42783225
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0117] Pyrimidine deaminase; [COG1985] Pyrimidine reductase, riboflavin biosynthesis
• TIGRFAM ID: [TIGR00227] riboflavin-specific deaminase C-terminal domain; [TIGR00326] riboflavin biosynthesis protein RibD

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGATC AAGAATATAT GAGGATTGCC CTGCAGTTAG CAGAAGGAAC ATCCGGACAA 
ACAAGTCCAA ATCCTATGGT TGGTGCTGTT GTTGTAAAAG ATGGAAACAT CGTCGGTATG 
GGAGCTCATT TGCGTGCTGG TGAAGAACAC GCAGAAGTCT ATGCTCTTCA TATGGCTGGC 
GAAAAAGCAA AAGGAGCTAC CGTTTATGTA ACACTTGAAC CTTGTAGCCA TTTTGGAAAA 
ACACCACCTT GCTGTGAATT GCTCATCAAA AAAGGAGTCA AACGGGTTGT AATTGCTACT 
CTTGATTGTA ATCCGCTCGT TTCTGGCAAT GGAAAAAGGA AATTAGAAGA AGCTGGCATC 
GAAGTAACGA CTGGTGTTCT TGAAGCAGAA GCAATTTTAT TAAATCGCTA CTTTTTTCAC 
TACATGAAAA CGAAACGTCC ATTTGTAACA ATAAAAACAG CAATGAGCTT GGATGGAAAA 
ACAGCAACCG TAACCGGTGA AAGTAAGTGG ATTACAGGTG AAGAATCACG AGCTGATGTT 
CACCAATACC GCCATACACA TGATGCGATT CTCGTTGGAG TGAATACAGT TATAGCTGAT 
AATCCGCATT TAACAACAAG AATTCCTAAC GGGGGACAAA ATCCTATACG CGTTATTTTA 
GATACCCATT TACGAACGCC ACCATCTTCT CATGTCATAA CAGATGGTTT AGCACCGACA 
TGGATTTTTG TCGGTAATGG TGTAGATAAA AAGAAAATAG CTTCTTATGA ATCTGAAAAT 
ATAGCTATAT TCCAAATGAA AACGAAACAG ATTGAAATAC AGGATGTTTT ACACCTACTC 
GGCGAAAAAC AAATTCTTTC TCTTTTCGTC GAAGGTGGTC AAACAGTTCA TGCAAGTTTC 
TTACAAACAA AGTATTTCAA TGAAATTGTA ACTTATATAA GTCCAAAATT AATTGGTGGA 
AAAAATGCCC CTACTTTATT TGGCGGCAAT GGTTTTTCAA CATTACAAGA TGCACTTTCC 
TTGGAAATTC AAGAGATGAA ACAAATTGGC GATGATATAA AAATTGTTGC GCATGCCCGA 
AGTGAGGTGA CGGAATGTTT ACAGGAATTG TAG 

 

Protein sequence

MTDQEYMRIA LQLAEGTSGQ TSPNPMVGAV VVKDGNIVGM GAHLRAGEEH AEVYALHMAG 
EKAKGATVYV TLEPCSHFGK TPPCCELLIK KGVKRVVIAT LDCNPLVSGN GKRKLEEAGI 
EVTTGVLEAE AILLNRYFFH YMKTKRPFVT IKTAMSLDGK TATVTGESKW ITGEESRADV 
HQYRHTHDAI LVGVNTVIAD NPHLTTRIPN GGQNPIRVIL DTHLRTPPSS HVITDGLAPT 
WIFVGNGVDK KKIASYESEN IAIFQMKTKQ IEIQDVLHLL GEKQILSLFV EGGQTVHASF 
LQTKYFNEIV TYISPKLIGG KNAPTLFGGN GFSTLQDALS LEIQEMKQIG DDIKIVAHAR 
SEVTECLQEL