Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCE_4158 |
Symbol | xerD |
ID | 2749845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus ATCC 10987 |
Kingdom | Bacteria |
Replicon accession | NC_003909 |
Strand | - |
Start bp | 3882889 |
End bp | 3883779 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637280955 |
Product | site-specific tyrosine recombinase XerD |
Protein accession | NP_980451 |
Protein GI | 42783204 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.44443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAGATC AATTAAAAGA TTTTATTCAT TATATGGTTG TTGAAAAAGG GCTAGCGAAA AATACAGTAG TATCTTATGA ACGTGATTTA AAAAGTTATG TAAAGTATTT GCAAAATGTA GAACAAGCGA AAAGCTTTCA CGAAGTGACA CGCTTGCACA TTGTTAATTT TCTGCAGCAC TTAAAAGAAA ACGGAAAATC TTCGAAAACA TTAGCACGTC ATATTGCATC GATTCGTTCG TTTCACCAAT TTTTACTTCG TGAACGAGCG GTAGAGCACG ATCCATCCGT ACATATTGAA ACGCCGCAAG GAGAACGGAA ATTACCGAAA GTATTGTCAG TTGATGAAGT AGAGGCGTTA CTGCAGACAC CAAAAATGAC GAGCGCTTTT GGGGTTCGTG ATAAAGCGAT GCTAGAGTTA TTATATGCAA CAGGACTTCG TGTTTCAGAA TTAATTGCAT TAAATTTAGA AGATGTACAT TTAACGATGG GGTTTGTTCG ATGCATAGGG AAAGGGAATA AAGAAAGAAT TATTCCACTA GGAAGTTTAG CGACGGAAGC GATTCAAAAG TATATTGAAA AGGGAAGAAG AGAATTGATG GGGAAAAAAG TAGTAGATGC ACTCTTTTTA AACCATCATG GAAATCGATT ATCAAGACAA GGATTTTGGA AAATTTTAAA ACGATTAGCG AAAGAAGCAA ATATTGAAAA AGAGCTTACA CCTCATACGT TGCGTCATTC TTTTGCTACG CATTTATTAG AAAATGGTGC AGACTTACGT GCTGTGCAAG AAATGCTTGG ACATGCAGAT ATTTCAACAA CACAAATCTA TACGCATGTT TCAAAAACTA GATTAAAAGA TGTATATAAA CAGTTTCATC CGAGAGCATA G
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Protein sequence | MEDQLKDFIH YMVVEKGLAK NTVVSYERDL KSYVKYLQNV EQAKSFHEVT RLHIVNFLQH LKENGKSSKT LARHIASIRS FHQFLLRERA VEHDPSVHIE TPQGERKLPK VLSVDEVEAL LQTPKMTSAF GVRDKAMLEL LYATGLRVSE LIALNLEDVH LTMGFVRCIG KGNKERIIPL GSLATEAIQK YIEKGRRELM GKKVVDALFL NHHGNRLSRQ GFWKILKRLA KEANIEKELT PHTLRHSFAT HLLENGADLR AVQEMLGHAD ISTTQIYTHV SKTRLKDVYK QFHPRA
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