Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCE_3875 |
Symbol | topA |
ID | 2747827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus ATCC 10987 |
Kingdom | Bacteria |
Replicon accession | NC_003909 |
Strand | - |
Start bp | 3623701 |
End bp | 3625779 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637280676 |
Product | DNA topoisomerase I |
Protein accession | NP_980172 |
Protein GI | 42782925 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA [COG0551] Zn-finger domain associated with topoisomerase type I |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000221974 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGATT ACCTCGTAAT CGTGGAGTCG CCTTCTAAGG CGAAGACCAT TGAGAAATAT TTAGGGAAAA AATACAAAGT TGTCGCGTCT ATGGGACACG TTCGCGATTT ACCTAAAAGC CAAATGGGGA TAGAAGTAAA GAACAACTTC ACCCCGAAGT ATATTACCAT TCGTGGTAAA GGTCCCGTCT TAAAAGACTT AAAATCAGCA GCAAAAAAAG CAAAGAAAGT CTATCTCGCG GCCGATCCAG ACCGCGAAGG GGAAGCTATT GCTTGGCATT TAGCCAATAC GTTAAATGTG GACGTTGAAT CAGATTGCCG AGTTGTGTTT AATGAGATTA CAAAAGATGC AATAAAGGAA TCCTTTAAAC ATCCTCGCGC GATTAACATG AATTTAGTAG ATGCACAACA AGCAAGACGT ATACTAGATC GTCTTGTTGG TTACAATATT AGTCCTTTAT TATGGAAGAA AGTAAAAAAA GGATTAAGTG CAGGACGCGT ACAATCTGTA GCAGTTCGTT TAATTATCGA ACGTGAAAGA GAAATTCAAA GTTTCGAGCC TGAAGAATTC TGGACAATTA AGACAGAATT TGTGAAAGGG AAAGACACAT TTGAAGCAAG CTTTTACGGT GTAGATGGTG AAAAAGTTCA ATTAACGAAT GAAACACAAG TGAATGAAAT AATTGAACGG CTGAAAGATA ATGCGTTCTC AGTTGAAAAT GTAACGAGAA AAGAGCGAAA ACGTAATCCG GCATTACCAT TTACAACATC TTCCTTGCAA CAAGAGGCGG CGCGTAAGTT AAACATGCGA GCAAAGAAAA CGATGATGCT TGCGCAGCAA TTGTATGAAG GAATTGATCT TGGAAAACAA GGAACTGTAG GTCTTATTAC GTATATGAGA ACTGATTCAA CACGTATCTC AGAAACAGCT CAAACAGAGG CACGTACGTA CATTACTGAG GCGTTTGGTA CGGAATACAT AGGAACAGAA AAGAAGAAAG AAACGAAGAA GTCGAACGCA CAAGATGCGC ATGAGGCAAT TCGTCCTACT TCGGTAATGA GAAAGCCAGA GGAACTAAAG AGTTTCTTAA GTCGTGATCA ACTTCGATTG TATAAATTGA TTTGGGAGCG ATTTGTTGCA AGTCAAATGG CGTCTGCTAT AATGGATACT GTGACAGCGA GACTCATTAA TAATAATGTT CAGTTCCGTG CAAGTGGATC GGTTGTAAAG TTCCCAGGAT TTATGAAAGT GTATGTAGAG TCGAAAGATG ATGGGGCTGA AGAAAAGGAT AAGATGTTGC CACCTTTAGA AGTAGGGGAA ACCGTATTTT CGAAGGATTT AGAACCGAAG CAACACTTTA CACAACCTCC GCCGCGCTAT ACAGAGGCTC GTTTAGTAAG AACACTTGAA GAGCTTGGAA TTGGAAGACC GTCGACTTAC GTACCGACAC TTGAAACGAT TCAAAAACGT GGATATGTAG GTTTGGATAA TAAACGCTTC GTTCCAACTG AACTAGGTGA AATAGTAATT GAACTTATTT TAGAGTTTTT CCCAGAAATT ATTAACATTG AATTTACTGC TAACATGGAG CAAAGCCTCG ATGAAGTAGA AGAAGGAAAT GCGAATTGGG TAAAAATTGT TGATGATTTC TACGTAGGAT TTGAACCGCG TTTAGAAAAA GCGGAAAAAG AAATGCGTGA AGTGGAAATT AAAGATGAAC CAGCTGGGGA AGATTGTGAA TTATGTAATC ACCCAATGGT CTTTAAAATG GGTAAATACG GGAAATTTAT GGCTTGCTCG AATTTCCCAG ATTGTCGTAA TACAAAACCG ATTGTGAAAG AAATCGGTGT TACTTGTCCG AAATGTGATA AAGGTCAAAT TATTGAGCGT CGTAGTAATA AAAAGAAACG TCTTTTCTAT GGGTGCGGTA CGTATCCAGA GTGTGACTTT GTATCTTGGG ATAAGCCGAT TGGCCGTAAA TGTCCGAAGT GTGAAGGTAT GCTAGTAGAG AAGAAGTTGA AAAAAGGCGT ACAAGTACAA TGTATTTCGT GTGATTATGA AGAAGAACAA CAAATGTGA
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Protein sequence | MSDYLVIVES PSKAKTIEKY LGKKYKVVAS MGHVRDLPKS QMGIEVKNNF TPKYITIRGK GPVLKDLKSA AKKAKKVYLA ADPDREGEAI AWHLANTLNV DVESDCRVVF NEITKDAIKE SFKHPRAINM NLVDAQQARR ILDRLVGYNI SPLLWKKVKK GLSAGRVQSV AVRLIIERER EIQSFEPEEF WTIKTEFVKG KDTFEASFYG VDGEKVQLTN ETQVNEIIER LKDNAFSVEN VTRKERKRNP ALPFTTSSLQ QEAARKLNMR AKKTMMLAQQ LYEGIDLGKQ GTVGLITYMR TDSTRISETA QTEARTYITE AFGTEYIGTE KKKETKKSNA QDAHEAIRPT SVMRKPEELK SFLSRDQLRL YKLIWERFVA SQMASAIMDT VTARLINNNV QFRASGSVVK FPGFMKVYVE SKDDGAEEKD KMLPPLEVGE TVFSKDLEPK QHFTQPPPRY TEARLVRTLE ELGIGRPSTY VPTLETIQKR GYVGLDNKRF VPTELGEIVI ELILEFFPEI INIEFTANME QSLDEVEEGN ANWVKIVDDF YVGFEPRLEK AEKEMREVEI KDEPAGEDCE LCNHPMVFKM GKYGKFMACS NFPDCRNTKP IVKEIGVTCP KCDKGQIIER RSNKKKRLFY GCGTYPECDF VSWDKPIGRK CPKCEGMLVE KKLKKGVQVQ CISCDYEEEQ QM
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