Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCE_0051 |
Symbol | mfd |
ID | 2752449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus ATCC 10987 |
Kingdom | Bacteria |
Replicon accession | NC_003909 |
Strand | + |
Start bp | 54537 |
End bp | 58067 |
Gene Length | 3531 bp |
Protein Length | 1176 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637276793 |
Product | transcription-repair coupling factor |
Protein accession | NP_976379 |
Protein GI | 42779132 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGGTT TATTAGAGCA ATTTTATAAA AATGAAGAGA TCCAATCGGT CATTAATGGA TTAGAAGATG GTTTAAAAGA GCAACTTGTA TCAGGTATGG CAACCTCTTC TCGTTCGTTA TTAATGGCGG CCTTATATAA AAAAACAAAA AAATCACAAC TTATTGTGAC GCATAATTTA TATCAAGCAC AAAAAGTACA TGAAGATTTA GTGGCGTTAC TTGGTGAAAA AGATGTATGG CTATATCCAG TAAATGAATT GATAGCATCA GAACTTGGTG TTGCAAGCCC AGAATTGAAG GCGCAACGTA TTGAAGTGTT AAATCGCTTA GCTGCAGGAG AGCACGGGAT TATTGTAGCA CCAGTTGCAG GACTACGCAG ATTTTTACCA ATGAAAGAGT TGTGGAAGCA AAGGCAAATC GAAATCAGTC TAGGGCAAGA GATTGATTTA GATACATTTT TGCATACTTT ACATCATATC GGCTATGAGC GTAAGTCTAT GGTAGAAGCT CCTGGAGAAT TTAGTTTGCG TGGGGGAATA TTAGATATAT ATCCACTAAC TGAAGAGTTA CCATTTCGTA TTGAATTTTT CGATACAGAA GTCGATTCTA TTCGATTATT TGATGTGGAT GAACAGCGCT CTCAAGATAA AAAAGAAAGT GTTAGATTTG GTCCAGCAAC AGAGTTTTTA TTTTCGCAGG AAGAATTGAA ATCAGGAATT AAGCATCTTG AAGAAGGTCT GACTAAGACG ATGCAAAAAC TTTCTGATGA TAAGTTGAAG ACTACAGTGC TTGAGACGGT AAGTCATGAA ATTGAGATGT TAAAAAACGG GCAAAGTATA GAACAGATGT TTAAATATTT ATCTATTTTC TATAATGAAC CTGCTAGTCT GATAGATTAT TTACCAGAAG ATGGTGTTGT TATTTTAGAT GAGATTTCAC GTATTCAAGA AACAGCATCA CATCTTGAAA CGGAAGAGGC GGAATGGTAT ATATCCCTTC TCGGTGAGGG AACAATTATT CAAGATTTAT CTTTCTCTCA TTCGTTTGAA GAATTTCTTC ATCATAAAAA AAGAAGTTTT GTATATTTAA CGTTATTCTT ACGTCATATA GCACATACAC ATCCGCAAAA CATTGTGAAT GTGACATGTA AAACAATGCA AGATTTCCAT GGGCAGATGC AGTTGTTGAA AACTGAAATT GATAGATGGA ACGAAGGGCA TTTTACGACT GTTGTGTTAG GTACAGATGA TGAACGTGTG AAAAAACTAC AACATATTTT AAGTGATTAT GATATTGAGG CAGATATTGT AGAAGGCACA GATATATTAT TGCCTGGAAG GTTACAAATT GCTGTAGGTG ATTTACATGC AGGATTTGAA ATGCCGATGC AAAAGCTTGT TGTCATTACT GAAAAAGAGC TTTTTCATAA GAAAGTTAAA AAATCACAAC GTAAGCAAAA GTTATCGAAT GCTGAACGTA TTAAAAGTTA TTCGGAATTA AAAGTTGGGG ATTATGTAGT TCATGTAAAT CATGGTATAG GTAAATTCTT AGGTATTGAA ACATTAGAGA TTAACGGTGT TCATAAAGAT TATTTGAATA TTAAATATCA AGGTAATGAT AAGTTATACG TTCCAATTGA ACAAATTGAC CAAGTGCAAA AATATGTAGG ATCTGAGGGT AAGGATCCGA AAGTTTATAA ATTGGGTGGA AATGATTGGA AGAAGGTCAA AACGAAAGTT GAAAAATCTG TACAAGACAT TGCGGATGAC CTAATTAAAC TATATGCTGA GCGCGAAGCT TCAAAGGGTT ATGCATATAC ACCGGATACG GCAGAACAAC AAGAATTCGA GTCCTCTTTC CCGTATCAAG AGACAGAGGA TCAATTACGT TCTATTGAAG AGATTAAAAA GGATATGGAA CGCGGACGTC CGATGGATAG GCTTCTTTGT GGTGATGTAG GATATGGAAA GACGGAAGTA GCTATTCGTG CGGCGTTTAA AGCAATTATG GATGAAAAAC AAGTTGCAAT TTTAGTGCCG ACAACGATCC TTGCACAACA ACACTATGAA ACAATTCGAG AGCGTTTTCA AGATTATCCA ATCAATATAG GATTATTAAG TAGATTCCGT ACGAGAAAGC AGCAAAATGA AACAATTAAA GGTTTAAAAG ATGGCACAGT AGATATTGTA ATCGGAACGC ACCGTATTTT ATCTAAAGAT GTTACTTATA AAGATTTAGG TCTTCTTATT ATTGATGAAG AACAAAGATT TGGTGTAACG CATAAAGAAA AAATTAAACA ATTAAAAGCA AATGTTGACG TATTAACACT AACGGCAACT CCGATTCCGC GTACGCTCCA TATGTCTATG CTTGGTGTGC GTGATTTATC TGTTATTGAG ACGCCGCCGG AAAATCGTTT CCCGGTTCAA ACATATGTAG TAGAGTATAA TCCAGCATTA ATGCGAGAAG CGATAGAACG GGAGCTTGCA AGAGGTGGTC AAGTTTACTT CCTATATAAT CGTGTAGAGG ATATCGAACG AAAAGCAGAT GAAATTTCGA TGTTAGTTCC AGATGCGCGT GTAACTTATG CACATGGGAA AATGAACGAG AGTGAATTAG AGTCTGTTAT GCTATCGTTT TTAGAAGGAC AGCATGATGT TCTTGTAAGT ACAACGATTA TTGAGACGGG TGTAGATATT CCAAATGTAA ATACATTAAT TGTATTTGAT GCAGATCGTA TGGGATTATC GCAGTTGTAT CAGCTTCGTG GGCGTGTTGG ACGTTCTAAT CGTGTTGCAT ATGCTTACTT TGCATACAAA CGGGATAAAG TGTTATCGGA AGTTGCGGAG AAGCGCCTGC AAGCCATTAA GGAGTTCACA GAGCTTGGAT CTGGTTTCAA AATTGCGATG CGAGATTTAT CAATTCGTGG TGCTGGTAAC TTGTTAGGAG CCGAACAACA TGGATTTATT GATTCTGTCG GATTTGATTT ATATTCTCAA ATGTTAAAAG ATGCAATTGA ACAGCGTAGA GGAACAGACG GAGTTGAAAA TACAGTTAAT GTTGAAATTG ATTTAGAAGT AGATGCATAT TTACCGGATG CTTATATTTC TGATAGTAAA CAAAAAATTA TGATGTATAA ACAGTTTAGA GGTGTTTCTG CAATTGAGGA TATTGAAGAG TTGCAGGAAG AGATGATAGA TAGATTTGGT GATTACCCGC AAGAAGTTGG TTACTTATTA CAAATCGCAA ATATTAAAGT ATTAGCAATG AAAGAACAAA TTGAATTAAT TAAGCAAAAT AAATTTGAAG TAACAATTCT GTTCTCAGAA CAAGCGAGTC AAAACATTGA TGGCGGAAAA TTATTCATGC TTGGAAATAG TTTTGGACGA ATGATCGGTC TAGGAATGGA AGGATCACAA TTGAAAATCG TCATGAAAAC AAATGGCTTA GAGACATCGA AGTGGTTAAC AATTGCTGAA AATTTATTAA AAGGCTTGCC AGATGTAAAA AAAGAAGTCA TAAATGCCTA A
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Protein sequence | MIGLLEQFYK NEEIQSVING LEDGLKEQLV SGMATSSRSL LMAALYKKTK KSQLIVTHNL YQAQKVHEDL VALLGEKDVW LYPVNELIAS ELGVASPELK AQRIEVLNRL AAGEHGIIVA PVAGLRRFLP MKELWKQRQI EISLGQEIDL DTFLHTLHHI GYERKSMVEA PGEFSLRGGI LDIYPLTEEL PFRIEFFDTE VDSIRLFDVD EQRSQDKKES VRFGPATEFL FSQEELKSGI KHLEEGLTKT MQKLSDDKLK TTVLETVSHE IEMLKNGQSI EQMFKYLSIF YNEPASLIDY LPEDGVVILD EISRIQETAS HLETEEAEWY ISLLGEGTII QDLSFSHSFE EFLHHKKRSF VYLTLFLRHI AHTHPQNIVN VTCKTMQDFH GQMQLLKTEI DRWNEGHFTT VVLGTDDERV KKLQHILSDY DIEADIVEGT DILLPGRLQI AVGDLHAGFE MPMQKLVVIT EKELFHKKVK KSQRKQKLSN AERIKSYSEL KVGDYVVHVN HGIGKFLGIE TLEINGVHKD YLNIKYQGND KLYVPIEQID QVQKYVGSEG KDPKVYKLGG NDWKKVKTKV EKSVQDIADD LIKLYAEREA SKGYAYTPDT AEQQEFESSF PYQETEDQLR SIEEIKKDME RGRPMDRLLC GDVGYGKTEV AIRAAFKAIM DEKQVAILVP TTILAQQHYE TIRERFQDYP INIGLLSRFR TRKQQNETIK GLKDGTVDIV IGTHRILSKD VTYKDLGLLI IDEEQRFGVT HKEKIKQLKA NVDVLTLTAT PIPRTLHMSM LGVRDLSVIE TPPENRFPVQ TYVVEYNPAL MREAIERELA RGGQVYFLYN RVEDIERKAD EISMLVPDAR VTYAHGKMNE SELESVMLSF LEGQHDVLVS TTIIETGVDI PNVNTLIVFD ADRMGLSQLY QLRGRVGRSN RVAYAYFAYK RDKVLSEVAE KRLQAIKEFT ELGSGFKIAM RDLSIRGAGN LLGAEQHGFI DSVGFDLYSQ MLKDAIEQRR GTDGVENTVN VEIDLEVDAY LPDAYISDSK QKIMMYKQFR GVSAIEDIEE LQEEMIDRFG DYPQEVGYLL QIANIKVLAM KEQIELIKQN KFEVTILFSE QASQNIDGGK LFMLGNSFGR MIGLGMEGSQ LKIVMKTNGL ETSKWLTIAE NLLKGLPDVK KEVINA
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