| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1671 |
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| Symbol | rpoN2 |
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| ID | 1223983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 2082881 |
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| End bp | 2084383 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637241534 |
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| Product | RNA polymerase factor sigma-54 |
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| Protein accession | NP_523230 |
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| Protein GI | 17549890 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAAAG CCGCTCTCGA AATGCGTGCG AAGCAGCATC TCGCGCTGAC GCCCCGGCTG
CAGCAGTCCG TGAAATTGCT GCAGCTGTCG GCGACCGAAT TTGCACAGGA AATGCAGGAA
GCGCTTGCCA GCAACCCGTT CCTGGAAGAA GTCGACGACA ACACGGGCGC ACCGCCGGAA
GCGGCCCGGC CCGGTGAAGC CATGCCCGGC ACCGAAGCCG ACGGCGCCAC CGCCGACCAC
TCGCCGCCGG ACGAGGCGCC CCTCGAGACC ACCACCAGCG CCATCGAGAC CGACCCCGCC
ATCGCCGCCT CCGACGAGTT TCCCGCCGAC TTCGGCAGCT ACACCAGCTA CGGCCCAGCC
CATCACGGCG ACGGCGAAGA CAGCGACATC GGCGAATGGG TGCACGCCAC GCCCACCCTG
CGCGAGCACC TGCGCCAGGA GCTGCTCAGC TACCGGCTCT CCGAGCGCGA CAGCCTGCTC
GCCCTGACGG TGGTCGAAGC GCTGGACGAC GACGGCTACC TGCGCCAGAC GCTCTTCGAG
CTGATGCCGC TGGCGCCGGT CGAGTCCGCG CCCACCGAGA AGGAAATGCA GATCGCGCTG
GCGCTGGTGC AGAGCCTGGA CCCGCCGGGC GTGGCCGCGC GCGATCTGTC CGAATGCCTG
CGCCTGCAGA TCGAGGCGCG TCCGGCCGAT ACGGAAGCCG AGGAGCGCGT GCAGGAGATC
GCGCAGGACA TCGTGCGCAG CCATCTGCCG CGCCTGGCCA AGCGCGACCT GACCCACATC
CGCCGCGCGG TCGGCTGCGA CGAAGACGAG CTGCGCGAAG CCTGCGCGCT GATCCGCACG
CTGGACCCGC GCCCGGGGCT GCGCTTCTCG CAGGCGCACG CGGGCTATGT CGTGCCCGAC
GTGATCGTCG CCAAAATCAA GGGCAAGTGG GTGGCCGTGA CCAACCCGGC GGTGGCGCCG
TGCGCGCGCA TCAACAAGGT CTACGCCGAA CTCTTCGCGC AGACGCGCGG CCATCACCGC
ACGCCGCTCG CGCACCAGTT GCAGGAAGCG CGCTGGCTGA TCCGCAACGC GCAGCAGCGC
TTCGCCACCA TCCAGCGCGT GGCCGAGGCC ATCGTCGCGC ACCAGAAGCA CTTCCTCGAA
TACGGCGAGG TCGCGATGCG GCCGCTGGTG CTGCGCGACG TGGCCGAAGA GCTGGGCCTG
CATGAATCGA CCATCTCGCG CGCCACCGGC AACAAGTTCA TGGCGACGCC GCGCGGCATC
TTCGAGTTCA AGTACTTCTT CTCGCGCCAG CTCGCCACCG ACACGGGCGG CGCCTGTTCG
GCGGCGTCCG TGCGGGCCCT GCTCAAGGAG ATGATCGAGG CCGAAGACGC GCAGGCACCG
CTGTCCGATG TGTCGCTGGC CAAGATGCTG GCCGAGCAGG GCGTGATCGT CGCGCGCCGC
ACGGTGGCCA AGTATCGCGG CCTGATGCGC ATCGCACCCG CCGAACTCCG GCGGCAGATC
TGA
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| Protein sequence | MVKAALEMRA KQHLALTPRL QQSVKLLQLS ATEFAQEMQE ALASNPFLEE VDDNTGAPPE
AARPGEAMPG TEADGATADH SPPDEAPLET TTSAIETDPA IAASDEFPAD FGSYTSYGPA
HHGDGEDSDI GEWVHATPTL REHLRQELLS YRLSERDSLL ALTVVEALDD DGYLRQTLFE
LMPLAPVESA PTEKEMQIAL ALVQSLDPPG VAARDLSECL RLQIEARPAD TEAEERVQEI
AQDIVRSHLP RLAKRDLTHI RRAVGCDEDE LREACALIRT LDPRPGLRFS QAHAGYVVPD
VIVAKIKGKW VAVTNPAVAP CARINKVYAE LFAQTRGHHR TPLAHQLQEA RWLIRNAQQR
FATIQRVAEA IVAHQKHFLE YGEVAMRPLV LRDVAEELGL HESTISRATG NKFMATPRGI
FEFKYFFSRQ LATDTGGACS AASVRALLKE MIEAEDAQAP LSDVSLAKML AEQGVIVARR
TVAKYRGLMR IAPAELRRQI
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