| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1390 |
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| Symbol | fliA |
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| ID | 1223702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1750605 |
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| End bp | 1751366 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637241253 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | NP_522949 |
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| Protein GI | 17549609 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGACG CGCCAAAGGC AGGCATGGAC ATGTATACCG CTACCGGTCG CAAGACCAAG
TCCGACGAGA TGGCCGCGTA CGCACCGCTG GTGCGCCGCA TCGCCAACCA GATGATGGTG
AAGCTGCCGG CCAGCGTCGA GCTCGACGAC CTGATCCAGG CCGGCATGAT GGGGTTGCTC
GACGCGCTGT CGCGCTACGA AGAAACCCAG GGCGTGCAGT TCGAGTTCTA TGCCGCCCAG
CGCATCCGTG GCGCCATCCT GGACGAGCTG CGCGGCTCGG ACTGGCTGCC GCGCGGGCTG
CGCCGCAACG CGCGCACCAT CGAGCAGGCG ATCCAGAAGC TGCAGCAGCA GAAGGGCCGC
GCGCCGACCG AGACCGAGAT TGCCGCCGCC CTGAACATGT CGCTGGCCGA CTACCAGAAG
CTGCTGGTGG AGCTGCAGGG CAGCCAACTG CTGTACTACG AAGACTTCGA CCGCGAAGAC
GCCGACGCCT TCATCGAGAA CCGCGCCCCC GAGAACGACG CGACGCCGCT GGACCAGCTG
CTCGACCACG ATCTGCGCGA GTCGGTGGTC GCCGCCATCG AGGCGCTGCC CGAGCGCGAG
AAGCTGATGA TGAGCCTGTA CTACGAGCAG GACCTGAACC TGCGCGAGAT CGGCGCCGTG
ATGGGCGTGT CGGAATCGCG CGTGTGCCAG ATCCACAGCC AGGCCATCGC CCGCATCCGC
TCGCGTCTGC GCGAGCGGGC CTGGCTGCCG ACGCCGGGCT GA
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| Protein sequence | MQDAPKAGMD MYTATGRKTK SDEMAAYAPL VRRIANQMMV KLPASVELDD LIQAGMMGLL
DALSRYEETQ GVQFEFYAAQ RIRGAILDEL RGSDWLPRGL RRNARTIEQA IQKLQQQKGR
APTETEIAAA LNMSLADYQK LLVELQGSQL LYYEDFDRED ADAFIENRAP ENDATPLDQL
LDHDLRESVV AAIEALPERE KLMMSLYYEQ DLNLREIGAV MGVSESRVCQ IHSQAIARIR
SRLRERAWLP TPG
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