| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1179 |
|---|
| Symbol | TIS1021 |
|---|
| ID | 1223491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | - |
|---|
| Start bp | 1486564 |
|---|
| End bp | 1487550 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637241044 |
|---|
| Product | TIS1021 transposase |
|---|
| Protein accession | NP_522740 |
|---|
| Protein GI | 17549400 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC AAACCAGCTT TTCGGAAGCG GAGTACGCGG GCAAGAAACG CGTGACCAAG
CGTGAGCGTT TCCTGGCGGA GATGGAGAAG GTCGTTCCAT GGACGCGGCT GGTTGCGGCA
GTCGAGCCGC ACTACCCCAA AGGAGAACGA GGACGGCCGC CAATCGGGCT GCAGAGGATG
CTGCGCATTT ATTTCTTGCA GCAGTGGTAC GGGCTGTCGG ACGAAGGACT GGAAGATGCG
TTGTACGACA GCATGGCGAT GCGTGCGTTC GCCGGCATTG ATCTGGCGGT CGAGAACGTG
CCGGACGCGA CCACGCTGCT GAAGTTCCGG CGCCTGCTGG TCGAGCATGA CCTGACTGGC
AAGCTGTTCG ACGAGATCGG CATCATGCTG TGCGAGCGGG GGCTGATGAT GAGGGAAGGC
ACGATCGTGG ATGCCACCAT CATCGAAGCG CCGCCGTCGA CCAAGAATGC CGAGAAGAGC
CGCGATCCGG AGATGCACCA GACCAAGAAG GGCAACGAAT GGCACTTTGG AATGAAGGCA
CACATTGGGG TGGATGCGTC GTCGGGCCTG GTGCATAGCG TGGTTGGCAC GGCAGCGAAT
GAGTCCGATG TCTCGCAGGC CCACGCGTTG CTGCATGGCC ATGAGGAAGA CGCGTTTGGC
GATGCAGGTT ACACCGGCGT TGAGAAGCGC GACGAGATGC AAGGCAAGGG CACGAAGTGG
CATGTTGCGC TCAAGCGCAG CAAGATCAAG GCGATGCGCG ATGGCGCCAT CAAGGACTTG
CTAATCGCGG CGGAGAGGAC CAAGGCTCAG ATTCGGGCTC GGGTCGAACA TCCGTTCCAT
GTCATCAAGA ATCTGTTTGG TCATCGCAAG GTTCGTTACA AGGGCTTGGC CAAGAACACG
GCGCAACTGT TCAGCTTGTT CGGTCTCGCC AATCTGGTGC TCGCCAGGAG CCAGTTGCTG
GCCAGCCCTG AAAGCATTCC GTCCTGA
|
|---|
| Protein sequence | MKKQTSFSEA EYAGKKRVTK RERFLAEMEK VVPWTRLVAA VEPHYPKGER GRPPIGLQRM
LRIYFLQQWY GLSDEGLEDA LYDSMAMRAF AGIDLAVENV PDATTLLKFR RLLVEHDLTG
KLFDEIGIML CERGLMMREG TIVDATIIEA PPSTKNAEKS RDPEMHQTKK GNEWHFGMKA
HIGVDASSGL VHSVVGTAAN ESDVSQAHAL LHGHEEDAFG DAGYTGVEKR DEMQGKGTKW
HVALKRSKIK AMRDGAIKDL LIAAERTKAQ IRARVEHPFH VIKNLFGHRK VRYKGLAKNT
AQLFSLFGLA NLVLARSQLL ASPESIPS
|
|---|
| |