Gene RSp1107 details

Gene Information

• Locus tag: RSp1107
• Symbol: ohr
• ID: 1223419
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: +
• Start bp: 1401782
• End bp: 1402207
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637240972
• Product: organic hydroperoxide resistance protein
• Protein accession: NP_522668
• Protein GI: 17549328
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1764] Predicted redox protein, regulator of disulfide bond formation
• TIGRFAM ID: [TIGR03561] peroxiredoxin, Ohr subfamily

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.463779
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.729784
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGATCG AAACCATCCT CTATCGTGCC CACGCCAATG CCACCGGCGG CCGCGACGGC 
CGCGCCGCCA CCGATGACGG CCGGCTGGAT GTCCGCCTCG CCACGCCCCG CGAGCTGGGC 
GGCGCCGGCG GCGAAGGCAC CAACCCCGAG CAGCTGTTCG CAGCCGGCTA CAGCGCCTGC 
TTCCTGGGCG CGATGAAGTT CGTCGCCGCG CGCGACAAGC TGCGCCTGCC CGCCGACACG 
AGCGTGCAGG GCTCGGTGGG CATCGGCGCG ATTCCGAACG GCTTCGGCAT CGAGGTGGAC 
CTGGCGATCA GCCTGCCCGG CATGGACCGC GCCGAAGCCC AGGCGCTGAT CGAGCGCGCC 
CACATCGTGT GCCCGTACTC CAACGCCACG CGCGGCAACA TCGACGTGCG CCTGAGCCTG 
GTCTGA 

 

Protein sequence

MSIETILYRA HANATGGRDG RAATDDGRLD VRLATPRELG GAGGEGTNPE QLFAAGYSAC 
FLGAMKFVAA RDKLRLPADT SVQGSVGIGA IPNGFGIEVD LAISLPGMDR AEAQALIERA 
HIVCPYSNAT RGNIDVRLSL V