Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0973 |
Symbol | narK2 |
ID | 1223285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1224973 |
End bp | 1226358 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637240838 |
Product | nitrite/nitrate ABC transporter transmembrane protein |
Protein accession | NP_522534 |
Protein GI | 17549194 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.939633 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCAA ACGTCCTCAC GCACTGGGAG CCGGAGAACC CTTCGTTCTG GCGCGCCACC GGCCAGTCGG TGGCCTATCG CAACCTGTGG ATCTCGATTC CCGCCCTGAT GATCGCGTTC GCGGTCTGGT CGTTGTGGAG CGTGGTCGTG GTCAACCTCG ACAAAGCGGG GTTTGCGCTC ACCAAGAACC AGATGTTCTG GCTCACCGCC TTGCCGGCGC TGTCGGGCGC CACGCTGCGC ATCTTCTATT CGTTCCTGGT GCCGATTTTC GGCGGGCGGC GCTGGACGGC GCTGTCCACG GCCAGCCTGC TGATCCCCGC GCTGGGCATG GGCATGGCGC TGCGCGATCC GCAGACGGGC TTTCCGACCC TGCTGGTCCT GGCGCTGCTG TGCGGCCTGG GCGGCGGCAA TTTCAGTTCG TCGATGGCCA ACATCAGCTT CTTCTTCCCC AAGCAGAAGA AGGGGCTGGC CACGGGGCTG AACGCCGGCA TCGGCAACCT GGGCGTGTCG GCGGTGCAGT TCATCACGCC GCTGGTGATT TCGGTCGGCG TGTTCGGCGC GCTGGGCGGC GACCCGCAGA CCTACACGGC CGGCGGCGTG GAGCGCAGCC TGTGGCTCCA GAATGCGGGC TTCCTGTGGG TGCCGTTCAT TCTCGCGGCG ACGCTGGCCG CGTGGTTCGG CATGCATGAC ATTGCCGATG CCCGCGCCTC CTTCGCCGAC CAGGCCGTGA TCTTCAAGCG CACCCACAAC TGGCTGATGT GCCTGCTGTA CGTCGGCACC TTCGGCTCGT TCATCGGCTT CTCGGCCGGG CTGGCACTGC TGACCAAGTC GCAGTTTCCC GATGTCGACC CGACCGCCTA CGTGTTCCTC GGGCCGCTGG CCGGCGCGCT CACGCGGCCG GTGGGGGGCT GGATTTCGGA CAAGCTCGGC GGGGCGCGCG TCACGCTGTT CACCTTCGCC GGCATGATCG CGGCGGTGGT GGGCGTGCTG ATGTTCCTGC CCGCCGAGGG CAATCCCGGC AGCTTCGCGG GCTTCCTCGC CATGTTCATC GTGCTGTTCG CGCTGACCGG CATCGGCAAC GGCTCGACCT TCCGCATGAT CCCGATCATC TTCCTCACGC AGCATCAGCG GGCGGCCCGG GGCCAGGACG ACGCCGCGCA GCGCCAGGCC GTCCAGGACG CCGGCAAGGA ATCGGCCGCC GTGCTGGGCT TCACCGGCGC GATCGGCGCG TACGGCGGCT TCTTCATCCC CAAGAGCTTC GGCACCTCGC TGGAGCTGAC GGGCTCGGTC AATGCCGCGC TGTACTGCTT CATCGCCTTC TACGTGGTGT GCGCACTGGT GACGTGGGCC ATCTACGCCC GCCGCAACGC GCCCATGCCG TGCTGA
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Protein sequence | MSSNVLTHWE PENPSFWRAT GQSVAYRNLW ISIPALMIAF AVWSLWSVVV VNLDKAGFAL TKNQMFWLTA LPALSGATLR IFYSFLVPIF GGRRWTALST ASLLIPALGM GMALRDPQTG FPTLLVLALL CGLGGGNFSS SMANISFFFP KQKKGLATGL NAGIGNLGVS AVQFITPLVI SVGVFGALGG DPQTYTAGGV ERSLWLQNAG FLWVPFILAA TLAAWFGMHD IADARASFAD QAVIFKRTHN WLMCLLYVGT FGSFIGFSAG LALLTKSQFP DVDPTAYVFL GPLAGALTRP VGGWISDKLG GARVTLFTFA GMIAAVVGVL MFLPAEGNPG SFAGFLAMFI VLFALTGIGN GSTFRMIPII FLTQHQRAAR GQDDAAQRQA VQDAGKESAA VLGFTGAIGA YGGFFIPKSF GTSLELTGSV NAALYCFIAF YVVCALVTWA IYARRNAPMP C
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