| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0963 |
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| Symbol | nrdD |
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| ID | 1223275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1215605 |
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| End bp | 1217656 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240828 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | NP_522524 |
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| Protein GI | 17549184 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.391943 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTGCA CGCAGGTCAC CAAGCGCGAC GGATCGCTGG CGCCGTTCGA CGGACAGAAG
ATCCGGCAGG CCATCGCGGC AGCCGGCCGG GCGACGAACG AATTCGATAC GCAGGAAGCG
CAGCGCCTGA GCGCGCACGT GATCGGCCAG CTGGCCGGGC TGGCCTGCCC GGGCATCGAG
ACCATCCAGA ACCATGTCGA GGAAGCCCTG GTGGTGGCCG GCTACTGGCG CACGGCGCGC
GCCTATATCG TCTACCGTGA GCAGCACGCC CGCCTGCGCG CGCTCAGGCA CACGCTGGTC
GACGTCGAGA GCACGATGGA CGAGTATCTC GAGCAGCGCG ACTGGCGCGT CAACGCCAAC
GCCAACCAGG GCTACAGCCT GGGCGGCCTG ATCCTGAACG TGGCCGGCAA GGTCACCGCC
AACTACTGGC TCTCGCACGT CTACAGCCCC GAGGCCGGGC ACGCGCATCG CGAGGGCGAC
CTGCACATCC ACGATCTCGA CATGCTGTCG GGCTACTGCG CGGGATGGTC CCTGCGCCAG
CTGCTGACCG AGGGCTTCAA CGGCGTGCCG GGCAAGGTGG AGGCCACGCC GCCGCGCCAT
ATGTCGGCGG CCATCGGCCA GATCGTCAAC TTCCTCGGCA CGCTGCAGAA CGAGTGGGCC
GGCGCGCAGG CGTTCAGCTC GTTCGACACC TACATGGCCC CGTTCGTGCG GCGCGACGCC
ATGTCGTACG CGGCGGTCAA GCAGGCCATG CAGGAGCTGA TCTACAACCT GAACGTGCCC
AGCCGCTGGG GCACGCAGAC GCCCTTCACC AACCTGACAT TCGACTGGAC CTGCCCGGCC
GACCTGCGCG AGCAGATCCC CTACCTTGGC GGCGAGGAGA TGCCGTTCAC CTACGGCGAC
CTCCAGCCCG AGATGGACAT GATCAACCGC GCCTACATCG AGGTCATGAT GGCCGGCGAT
GCCAAGGGCC GCGCCTTCAC CTTCCCCATC CCGACGTACA ACATCACGCC CGATTTCGAC
TGGGACCACC CCAACACCAA GCGGCTGTTC GAGATGACGG CCAGGTACGG GCTGCCGTAC
TTCCAGAACT TCTTGAACTC CGACCTGGAG CCGCACATGG TGCGCTCGAT GTGCTGCCGC
CTGCAGCTTG ACCTGCGCGA GCTGCTCAAG CGCGGCAACG GCCTGTTCGG CTCGGCGGAG
CAGACCGGGT CGATCGGCGT GGTCACCGTC AACTGCGCGC GGCTGGGCCA TCTGCATGCA
GGCGACGAGG CGGCGCTCAT GGCCCGCCTG GACACCCTGC TCGCGCTCGG CCGCGACGTG
CTGGAAGTCA AGCGCAAGTT CGTGCAGCGG CTGATCGACC AGGGGCTGTA TCCCTACACG
CGCCGCTACC TGGGCACGCT GCGCAACCAC TTCAGCACGC TGGGCGTGAA CGGCGTCAAC
GAGATGATCC GCAACTTCAG CGGCGACGCC GACGACATCA CCACCCCCGC CGGCCACGCG
ATGGCGGTGC GGCTGCTCGA CCATGTGCGC CTGCGCATGG CCGAGTTCCA GGAGGCGACC
GGCCATCTCT ACAACCTGGA GGCCACGCCG GCCGAAGGCA CGACCTACCG CTTTGCCCGC
GAAGACCGCA AGCGCTGGCC CGACATCCTC CAGGCCGGCA CGCCCGAGCA GCCGTACTAC
ACCAATTCCA CCCAGTTGCC GGTCGGCTAC ACCGACGACC CGTTCGAGGC GCTGGCCCGG
CAGGAAGCGC TGCAGGGCAA GTACACCGGC GGCACGGTGC TGCACCTGTA CATGAACGAG
GCGATCTCGT CGCCGCAGGC CTGCAAGCAG CTGGTGCGCC GGGCGCTGTC GAACTTCCGC
CTGCCCTACA TCACCATCAC GCCGACGTTC TCGATCTGCC CGAAGCACGG CTACCTGTCC
GGCCACCACG CGTTCTGCCC CAAGTGCGAC GCGGAGCTGC TGGCCCAGCA GGCACACGCC
GGCTGCGGCT GCGCGGCGGC TCCGGCCACC GGTTCTTCCA CCCGTTCCAA CCAAGAAGGA
GCACCCGCAT GA
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| Protein sequence | MTCTQVTKRD GSLAPFDGQK IRQAIAAAGR ATNEFDTQEA QRLSAHVIGQ LAGLACPGIE
TIQNHVEEAL VVAGYWRTAR AYIVYREQHA RLRALRHTLV DVESTMDEYL EQRDWRVNAN
ANQGYSLGGL ILNVAGKVTA NYWLSHVYSP EAGHAHREGD LHIHDLDMLS GYCAGWSLRQ
LLTEGFNGVP GKVEATPPRH MSAAIGQIVN FLGTLQNEWA GAQAFSSFDT YMAPFVRRDA
MSYAAVKQAM QELIYNLNVP SRWGTQTPFT NLTFDWTCPA DLREQIPYLG GEEMPFTYGD
LQPEMDMINR AYIEVMMAGD AKGRAFTFPI PTYNITPDFD WDHPNTKRLF EMTARYGLPY
FQNFLNSDLE PHMVRSMCCR LQLDLRELLK RGNGLFGSAE QTGSIGVVTV NCARLGHLHA
GDEAALMARL DTLLALGRDV LEVKRKFVQR LIDQGLYPYT RRYLGTLRNH FSTLGVNGVN
EMIRNFSGDA DDITTPAGHA MAVRLLDHVR LRMAEFQEAT GHLYNLEATP AEGTTYRFAR
EDRKRWPDIL QAGTPEQPYY TNSTQLPVGY TDDPFEALAR QEALQGKYTG GTVLHLYMNE
AISSPQACKQ LVRRALSNFR LPYITITPTF SICPKHGYLS GHHAFCPKCD AELLAQQAHA
GCGCAAAPAT GSSTRSNQEG APA
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