Gene RSp0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp0961 
Symbolkbl 
ID1223273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1213294 
End bp1214493 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content67% 
IMG OID637240826 
Product2-amino-3-ketobutyrate coenzyme A ligase 
Protein accessionNP_522522 
Protein GI17549182 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.185356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAATG CCGAAGCATT CTATGCATTC ATCCGCACCG AACTCGACGC AATCCGCGAG 
GCGGGGCTAT TCAAGCAGGA GCGCGTGATC GCCTCGCCGC AGGGCGCCCG CGTGCGCACC
ATCGACGGCC GGGAGGTCAT CAACCTGTGC GCAAACAACT ACCTGGGCCT GTCGTCGCAT
CCGCGGGTGA TCGACGCCGC GCATGAAGCG CTGCGTACGC ATGGCTTCGG GCTCAGTTCG
GTCCGCTTCA TCTGCGGCAC GCAAGACTTG CACAAGACGC TGGAAGCGCG CCTTTCCGCC
TTTCTCGGTA CCGAGGACAC GATCCTCTAC GGCTCCGCGT TCGATGCCAA CGGCGGCCTG
TTCGAGACGC TGCTGGGCGC CGAAGACGCG GTCATCAGCG ATGCGCTGAA CCACGCGTCG
ATCATCGACG GCATCCGCCT GTGCAAGGCG CGCCGCTACC GTTACCAGCA CAACGACCTG
GATGACCTGC GCGCGCAGCT GACACAGGCG CGCGCGGACG GTGCGCGCCA TTTGCTGGTG
TTCACCGATG GCGTTTTCTC GATGGACGGC ACCATTGCCC GGCTGGACGA AATGCGCTCG
ATCTGCGACG CGCATGGTGC GCTGCTCGGC ATCGACGAAT GCCACGCCAC CGGTTTCCTG
GGCCCACGGG GCCGGGGCAC GCACGAGCTA CGCGGCGTAT TCGGCAAGGT GGACATCATC
ACGGGTACCC TGGGCAAGGC GCTGGGCGGT GCGTCGGGGG GCTTCACCAG CGCCCGCAAG
GAAGTGGTGG CGCTGCTGCG CCAGCGTTCG CGGCCGTACC TGTTCTCCAA TACGGTGGCG
CCCGCGATCA TCGGGGCGTC GATCGCGGTG CTCGATATCC TGGAGGGCAG CACGGAACTG
CGCGACCGGC TGGAGCGCAA CACGCGGTTC TTCCGTGCGG GGCTCGAGGC ACTGGGCTTC
GACGTCAAGC CGGGCGAGCA CCCCATCATC CCGATCATGG TGTACGACGC CGACAAGGCA
CAGCAGCTCG CGCAACGGCT GCTCGAGCTG GGCGTGTACG TGGTGGGCTT CTTCTACCCG
GTGGTGCCCA AGGGGCAGGC CCGCATCCGG GTGCAGATGA GCGCGGTACA TGACGAAGCC
GCCCTGCAGG CGGCGCTCGG CGCGTTCGGC CAGGCTGGCC ACGAACTGGG GCTGATCTGA
 
Protein sequence
MPNAEAFYAF IRTELDAIRE AGLFKQERVI ASPQGARVRT IDGREVINLC ANNYLGLSSH 
PRVIDAAHEA LRTHGFGLSS VRFICGTQDL HKTLEARLSA FLGTEDTILY GSAFDANGGL
FETLLGAEDA VISDALNHAS IIDGIRLCKA RRYRYQHNDL DDLRAQLTQA RADGARHLLV
FTDGVFSMDG TIARLDEMRS ICDAHGALLG IDECHATGFL GPRGRGTHEL RGVFGKVDII
TGTLGKALGG ASGGFTSARK EVVALLRQRS RPYLFSNTVA PAIIGASIAV LDILEGSTEL
RDRLERNTRF FRAGLEALGF DVKPGEHPII PIMVYDADKA QQLAQRLLEL GVYVVGFFYP
VVPKGQARIR VQMSAVHDEA ALQAALGAFG QAGHELGLI