| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0655 |
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| Symbol | copR |
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| ID | 1222962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 833513 |
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| End bp | 834199 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637240515 |
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| Product | two component response regulator transcription regulator protein |
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| Protein accession | NP_522216 |
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| Protein GI | 17548876 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.81937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTGC TAGTCGTCGA AGACGAAGCC AAGACCGGCG AATACCTCCA GCAGGGCCTG
ACCGAGGCCG GGTTCGTGGT GGATCTCGCC CGCAACGGCG TGGACGGCCT GCACCTCGCC
ACGATGGGCG ACTACGACCT GCTGGTGCTC GACGTGATGC TGCCCGACCT GGACGGCTGG
CAGGTCGTGC AATCGCTGCG CGCGGCCGCG TGCGCGGTGC CGGTGCTGTT CCTGACCGCG
CGCGACAGCG TGGGCGACCG GGTCAAGGGG CTCGAGCTGG GCGCCGACGA TTACCTGGTC
AAGCCGTTCG CCTTCGCGGA GCTGCTGGCG CGGGTCCGCA CCCTGCTGCG CCGGGGCAGC
ACGCCGGTCG CGCTCGACCG CATCCAGATC GCCGACCTCG TGCTCGACCT GGCCCGCCGC
CGGGCCTCGC GCTCGGGGCA GCGGATCGCG CTGACCAGCA AGGAGTTCGC CCTGCTCGAA
CTGCTGGCCC GCCGCCGCGG CGAAGTGCTG CCGCGCTCGC TGATCGCCTC CCAGGTGTGG
GACATGAACT TCGACAGCGA CACCAACGTG ATCGACGTCG CCATCCGCCG GCTGCGCGCC
AAGATCGACG ACGACTTCAC GCCGAAGCTG ATCCAGACGG TGCGCGGCAT GGGCTACGTG
CTCGAAGACC CGGAGGACGC GGCATGA
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| Protein sequence | MKLLVVEDEA KTGEYLQQGL TEAGFVVDLA RNGVDGLHLA TMGDYDLLVL DVMLPDLDGW
QVVQSLRAAA CAVPVLFLTA RDSVGDRVKG LELGADDYLV KPFAFAELLA RVRTLLRRGS
TPVALDRIQI ADLVLDLARR RASRSGQRIA LTSKEFALLE LLARRRGEVL PRSLIASQVW
DMNFDSDTNV IDVAIRRLRA KIDDDFTPKL IQTVRGMGYV LEDPEDAA
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