Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0395 |
Symbol | fliK |
ID | 1222702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 499677 |
End bp | 501227 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637240255 |
Product | flagellar hook-length control protein |
Protein accession | NP_521956 |
Protein GI | 17548616 |
COG category | [N] Cell motility |
COG ID | [COG3144] Flagellar hook-length control protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.475932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTGCCA CTCCCAATAC CGCCGCGACC GACCTGGGCG CGATGCTGTC GAGCGCCGGC ACGGCCGCCG ACAAGTCGCA GGCCGCGTCG TCCGGCGCCG ATACCTTCGG CAACCTGCTG TCGGATCGCC TGAACCAGGA GGCCGCGCGC CGCCAGACCG ATGCGCAATC GGCCGGCAGC CGCGCCGCCG CCCGCCGCGC CGATGCCACG AAGAAAGACG CGGCCAAGGC CAGCGCGGCC GGCAACGATC AGGACGCGCG TCAGGCCGAC CGCAATGCCG ACGCGGCGCC GGCGACCGCC GCCGCTTCGG CCACGCAGGA TGCACAGGCT TCCAAGGCCG CGTCGAGCGA CGACACCCAG GACAAGACCG CCGCCGCGCA GGCGGGCGTC GATCCCGCGG CACAGCTGGC CGCGCAGATC GAAGCCGCGC GCCAGGCCAT GCAGCAGGCC GCCGCTCCGG TGTCCCAGCC CGGCACGCAG GTCGCGACGG CGGACGATGC CGCCGCGCAG CTCGCGGCCG GCAAGGCGGG CGCCGCCACC ACCGACGCGG CCGCGCTGGC GGCCCTGAGC GCCGCCAATG CCGCGGCCGG CAAATTGACC GATCCGGCGG CCACCGTCGC CCAGCCGCAG GCTGCGCAAG CCGACGCCCT CAAGGCGGCG GCCGGCAAGG AGGCCCAGGC GGCCAAGCCG ACGCCGCTGC CCGATGCCAG CACCGTCGCC CAGGCGCTGG CCCGCACGCG CGGCACCACC GACAATACGC CGCCGGCCGT GCGCCACCTG GGCAGCGCAT CGTCGTCCGC GCAGGGCGCC GGCAGCGAGC GTGGCAGCGC GGCGCACCGC ACCGAAGCCG GGCAGGGCAC GCAGGCGCAA GCCGCGACCG CCGCCACGGC CGAGACCGGC CGCAACGCGG ACACCAGCGG CAACCCCAAC ACGCAGGCCG ATGCCCAGGG CGCCGGCGCC AAGTTCGATG GCGTCCTGAC GCGCGCCAAC GGGGATGCCG TCGCCACCGC GCCAACCTTC ACCGTGGGCG GCGCCGGTAC CGCCGGCAGC GCAGCGAGCG CCGCGGTCAC ACCCGCGCAG GCGCATACCC TGCCGACCTT CGGCGATGCC GCCTGGCCGC ACACCATGGC GAGCCAGCTG GCCTACATGC AGGTCCATCG CCAGTCGTCC GCCGAACTGC AGTTGAGCCC GGCCGAGCTC GGCGGGCTGC ATGTCAAGCT CGAGATCGAC AACGGCGCTG TCAATGCCAG CTTCGTCTGT CAGCACCAGG CCGTGGCGGA ACTGGTGCAG GACGCCATGC CACGCCTGCG CGATGCCATG CAGCAGGGCG GCATGGAGCT CGCGCAGACC TCCGTCAGCA CCGGCGATTT CAGCCAGCAG GGCGCCTCGC AAGGGTCGTC CGCGCAGGGC AACGGCAGCG GTGGCGGCAA TGGCGGCGGC AGCGGCGGCA ACCGGTTTGC CGGCACGCAG GGGCAGGCCG GCACCGGCAC GGTGGCCGTG TCCGCGCCGC GCGTCTCCAG CCATGCCGGC GCCATCGACA CCTTTGCTTA A
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Protein sequence | MSATPNTAAT DLGAMLSSAG TAADKSQAAS SGADTFGNLL SDRLNQEAAR RQTDAQSAGS RAAARRADAT KKDAAKASAA GNDQDARQAD RNADAAPATA AASATQDAQA SKAASSDDTQ DKTAAAQAGV DPAAQLAAQI EAARQAMQQA AAPVSQPGTQ VATADDAAAQ LAAGKAGAAT TDAAALAALS AANAAAGKLT DPAATVAQPQ AAQADALKAA AGKEAQAAKP TPLPDASTVA QALARTRGTT DNTPPAVRHL GSASSSAQGA GSERGSAAHR TEAGQGTQAQ AATAATAETG RNADTSGNPN TQADAQGAGA KFDGVLTRAN GDAVATAPTF TVGGAGTAGS AASAAVTPAQ AHTLPTFGDA AWPHTMASQL AYMQVHRQSS AELQLSPAEL GGLHVKLEID NGAVNASFVC QHQAVAELVQ DAMPRLRDAM QQGGMELAQT SVSTGDFSQQ GASQGSSAQG NGSGGGNGGG SGGNRFAGTQ GQAGTGTVAV SAPRVSSHAG AIDTFA
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