Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0376 |
Symbol | fliO |
ID | 1222683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 480557 |
End bp | 480949 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637240236 |
Product | flagellar FLIO transmembrane protein |
Protein accession | NP_521937 |
Protein GI | 17548597 |
COG category | [N] Cell motility |
COG ID | [COG3190] Flagellar biogenesis protein |
TIGRFAM ID | [TIGR03500] flagellar biosynthetic protein FliO |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCACG CAGTCGATTG GGCCCGCACC TTCGGCGGGC TGCTCATAGT GCTTGCCATG ATCGTGGCGG CCGGCTGGCT GCTGCGCAAG CTGCAGCAGC GCGCGGGCAT GGGCCCCGCC GGGCGCCGCA GCCAGGTGCT GTCCGTGGTG GCCCAGCAGA TGCTGGGCGC GCGCGAAAAA GTGGTGGTGG TGGAGGTGCA GGGCACGTGG CTGGTGCTGG GCGTCACGCA GCAGCACGTC CAGACGCTGC ACACCCTGCC GCGCCCGGCC GATGCCGGCG CGCCCGTGGC CGACGATCCG CCCACCCACG ACACCCACGG CGGCAAGCCG CCCGCCTTTG CCGATGCGCT GGCGCTGCAG ATCAAGCGCC GCCTGACGGG GAAGCCGCAA TGA
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Protein sequence | MNHAVDWART FGGLLIVLAM IVAAGWLLRK LQQRAGMGPA GRRSQVLSVV AQQMLGAREK VVVVEVQGTW LVLGVTQQHV QTLHTLPRPA DAGAPVADDP PTHDTHGGKP PAFADALALQ IKRRLTGKPQ
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