| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0246 |
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| Symbol | ahpF |
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| ID | 1222377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 319171 |
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| End bp | 320745 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637240105 |
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| Product | alkyl hydroperoxide reductase subunit F |
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| Protein accession | NP_521807 |
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| Protein GI | 17548467 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
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| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0118696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0355514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGACG CTGATGTCAA GGCCCAACTG AAAGCCTACC TCGAACGCCT TGTGCAGCCC
ATCGAACTGG TTGCCTCGAT CGATGACAGC GAAGGCTCCC GCGACATGAT GGACCTGCTG
CGTGATGTCG CCGCGCAGTC CGGCATGATC GCGCTCACCG AACAGCGCGA CGACGCCGAG
CGCAAGCCGT CGTTCCTGAT CCGCCGCACC GGCACCGATG TCGGTGTCCG TTTCGCGGCC
ATCCCGACCG GCCACGAGTT CACCTCGCTC GTGCTCGCGC TGCTGCAGGT GGGCGGCTAC
GCCCCCAAGC TCGATGACGA TGTCATCGAA CAGATTCGCA ACATCGAAGG CGATTTCCGC
TTCGAGACCT ATATGTCCCT GACGTGCCAG AACTGCCCGG ACGTGGTCCA GGCGCTGAAC
GTCATGTCGG TGATCAACCC GCGCATCCAG CACGTCGCCA TCGACGGCGC GCTGTTCCAG
GACGAAGTGG AAGCGCGCAA GATCATGGCC GTGCCGACCC TCTTCCTGAA CGGGGAAGTC
CTCGGCCAGG GCCGCATGGG CGTGGAAGAG ATCCTCGCCA AGATCGACAC CGGCGCCGCC
GCCCGCGACG CCGAGAAGCT CAACGCCCGC GCACCGTACG ACGTGCTGAT CGTCGGCGGC
GGGCCGGCCG GCGCGGCGGC GGCCGTGTAT GCCGCGCGCA AGGGCGTGCG CACCGGCGTG
GTGGCTGAGC GCTTCGGCGG CCAGGTGCTC GACACGATGA GCATCGAGAA CTTCATCTCC
GTGCCGGAGA CCGAAGGGCC GAAGTTCGCC GCCGCGCTGG AGCAGCACGT GCGCCAGTAC
AACGTCGACA TCATGAACGT GCAGCGCGCC GTCAAGCTCA CGCCGGCCGA CGAGCCGGGC
GGCCTCGCCG AGGTGACGCT GGCCAACGGC GCGGTGCTCA AGGGCCGCTC GATCATCGTG
TCGACCGGCG CGCGCTGGCG CAACGTCAAC GTGCCGGGCG AGCAGGAATA CCGCAACCGC
GGCGTGGCGT ACTGCCCGCA CTGCGATGGT CCGCTGTTCA AGGGCAAGCG CGTGGCCGTG
ATCGGCGGCG GCAACTCCGG CGTGGAAGCC GCGATCGACC TGGCGGGCAT CGTCAGCCAT
GTCACGCTGC TCGAGTTCGG CGACCAGCTC AAGGCCGATG CCGTGCTGGT GCGCAAGCTG
GAAAGCCTGC CCAACGCGAC CATCCTCACC AACGCCCAGA CCACCGAGAT CACCGGTAAC
GGCGAAAAGG TCAACGGCCT GCGCTACAGG CACCGCACCA ACGGCGCCGA GCACGACGTC
GCGCTGGAGG GCGTGTTCGT GCAGATCGGC CTGGTGCCCA ACACCGAGTG GCTCGACGGC
GTGGTGGAGC GCAACCGCTT CGGCGAGATC ATCGTCGATG CACGTGGCCA CACCAGCGTG
CCGGGCGTGT TCGCGGCGGG CGATTCGACC ACGGTGCCGT TCAAGCAGAT CATCATCGCC
ACGGGCGAGG GTGCCAAGGC CGCATTGTCC GCCTTCGATC ACCTGATCCG GGTGCCGCTG
GCCGAAGCCG CCTGA
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| Protein sequence | MLDADVKAQL KAYLERLVQP IELVASIDDS EGSRDMMDLL RDVAAQSGMI ALTEQRDDAE
RKPSFLIRRT GTDVGVRFAA IPTGHEFTSL VLALLQVGGY APKLDDDVIE QIRNIEGDFR
FETYMSLTCQ NCPDVVQALN VMSVINPRIQ HVAIDGALFQ DEVEARKIMA VPTLFLNGEV
LGQGRMGVEE ILAKIDTGAA ARDAEKLNAR APYDVLIVGG GPAGAAAAVY AARKGVRTGV
VAERFGGQVL DTMSIENFIS VPETEGPKFA AALEQHVRQY NVDIMNVQRA VKLTPADEPG
GLAEVTLANG AVLKGRSIIV STGARWRNVN VPGEQEYRNR GVAYCPHCDG PLFKGKRVAV
IGGGNSGVEA AIDLAGIVSH VTLLEFGDQL KADAVLVRKL ESLPNATILT NAQTTEITGN
GEKVNGLRYR HRTNGAEHDV ALEGVFVQIG LVPNTEWLDG VVERNRFGEI IVDARGHTSV
PGVFAAGDST TVPFKQIIIA TGEGAKAALS AFDHLIRVPL AEAA
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