| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0069 |
|---|
| Symbol | adhC1 |
|---|
| ID | 1222617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 79046 |
|---|
| End bp | 80152 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637239928 |
|---|
| Product | bifunctional: glutathione-dependent formaldehyde dehydrogenase/alcohol dehydrogenase class III |
|---|
| Protein accession | NP_521630 |
|---|
| Protein GI | 17548290 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
|---|
| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCA AAGCCGCCAT CGCCTGGAAA GCCGGTGCCC CGCTCACCGT GGAAGAAGTC
GACCTGCAAG GCCCGCGCGC CGGCGAGGTG CTCGTCGAGA TCAAGGCCAC CGGCATCTGC
CATACCGACT ACTACACGCT CTCGGGCGCG GACCCGGAAG GCATCTTCCC AGCCATCCTC
GGGCATGAGG GTGCGGGCGT CGTGCTGGAA GTGGGTGCGG GCGTGACCTC GCTCAAGGCG
GGCGACCACG TGATCCCGAT CTACACGCCG GAATGCCGCC AGTGCAAGTT CTGCCTCTCG
CGCAAGACCA ACCTGTGCCA GGCGATCCGC GCCACGCAGG GCAAGGGGCT GATGCCGGAC
GGCACCTCGC GCTTCTCGCT CGACGGCAAG CCGCTGTTCC ACTACATGGG CACGTCCACG
TTTGCGAACC ACATCGTGGT GCCGGAGATT GCGCTCGCGA AGATCCGCCC GGACGCGCCG
TTCGACAAGG TCTGCTACAT CGGCTGCGGC GTCACCACGG GCGTGGGTGC GGTGGTGTAC
ACGGCCAAGG TGGAAGCCGG TGCCAACGTG GTGGTGTTCG GCCTGGGCGG CATCGGCCTG
AACGTGATCC AGGGCGCCAA GATGGTCGGC GCCGACAAGA TCATCGGCGT GGACCTGAAC
CCCGCGCGTG AAGCCATGGC GCGCAAATTC GGCATGACGC ACTTCATCAA CCCGAAGGAC
GTCGGCAACG TGGTCGACCA CATTATCCAG CTCACGGATG GCGGCGCGGA TTACTCGTTC
GAATGCATCG GCAACACGCA GGTCATGCGG CAGGCGCTGG AGTGCACCCA TAAGGGCTGG
GGCCAGTCGA TCATCATCGG CGTGGCGGAA GCCGGGGCGG AGATCAGCAC GCGCCCGTTC
CAGCTCGTGA CCGGCCGTGA ATGGAAAGGC TCGGCCTTTG GTGGCGCACG CGGCCGCACC
GACGTGCCGA AGATCGTCGA CTGGTACATG GAAGGCAAGC TCAACATCGA CGACCTCATC
ACGCACACGC TGCCGCTGGA GCGCATCAAC GAGGGCTTCG ACCTGATGAA GCGCGGCGAG
TCGATCCGTT CGGTTGTCTT GTATTAA
|
|---|
| Protein sequence | MKTKAAIAWK AGAPLTVEEV DLQGPRAGEV LVEIKATGIC HTDYYTLSGA DPEGIFPAIL
GHEGAGVVLE VGAGVTSLKA GDHVIPIYTP ECRQCKFCLS RKTNLCQAIR ATQGKGLMPD
GTSRFSLDGK PLFHYMGTST FANHIVVPEI ALAKIRPDAP FDKVCYIGCG VTTGVGAVVY
TAKVEAGANV VVFGLGGIGL NVIQGAKMVG ADKIIGVDLN PAREAMARKF GMTHFINPKD
VGNVVDHIIQ LTDGGADYSF ECIGNTQVMR QALECTHKGW GQSIIIGVAE AGAEISTRPF
QLVTGREWKG SAFGGARGRT DVPKIVDWYM EGKLNIDDLI THTLPLERIN EGFDLMKRGE
SIRSVVLY
|
|---|
| |