| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05823 |
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| Symbol | RSp1167 |
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| ID | 1223479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1466406 |
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| End bp | 1469858 |
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| Gene Length | 3453 bp |
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| Protein Length | 1150 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637241032 |
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| Product | hypothetical protein |
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| Protein accession | NP_522728 |
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| Protein GI | 17549388 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.483181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACGAA TTGCGACGCC ACTCAGTGAA ATCAAGGAGC ATTACGACAT TGTGGTGATC
GGGTCCGGCT ATGGCGGAGG CATTGCTGCA TCGCGCATGG CGCGAGCGGG CCGCACAGTC
TGTCTGCTGG AGCGCGGCCG CGAAATCATT CCCGGCGAAT ATCCCAATAC CCTGGCGGAG
GCGACGGAAG AGTTTCAAGT CCATCACCCC GATGGCCATA TCGGCTCACG CACCGGTTTG
TACGATCTGC ATGTCAATGC CCAGCAAAAC GTCGTCGTGG GCTGTGGCCT GGGCGGCACC
TCGCTGATCA ACGCCAACGT CTCGCTGGAG CCCGAGCCTC AGGTCTTCGA AGACCCCCGC
TGGCCCCGGC ACGTGCGTGA GCATGCCGAT ACCTTGCTCA AGGAAGGCTT CGCCCGGGCG
CGGGAAATGC TCCGGCCCAC CCCTTACCCC GGCACGGCGG CCGCCTTGCC CAAGCTGCAG
GCCAACGAAA AGTCCGCCTC GCAGATGCAG GCTCCGCACA CCTTCTATCG CCCGCCCATC
AATGTCACGT TCGACGACTT GCCGGACAAC CGCAACCACG TGGGCGTGGA GCAATTGCGC
TGCAACGATT GCGGCGACTG TGTCTCCGGC TGCAACAACA AAGCCAAGAA CACCACGCTG
ATGAACTACC TGCCCGATGC CAGCAATCAC GGCGCGGAGA TTTTCTGCCA GGCATCGGTC
CGCTATCTGG AGCGCGATGG CGATGGCTGG ATCGTGCACT ACCAGTATGT CGGCACCGGG
CGGGAGGCAT TCGATGCGCC AACGCTGTTC GTTAAAGCCA ACATCGTCGT ACTCTCCGCC
GGCACGTTGG GCTCGACGGA GATCCTGCTG CGTTCGCGCA CCCAGGGCTT GCTGCTCTCC
GAGAAGCTGG GCAAGCACAT GAGCGGCAAC GGCGACATCC TGGGCTTCGG TTACAACAAC
AACGACAAGA TCAACGGCAT CGGGTTCGGC GCGCACTCCG GCAAAGGCAT CGGCCCGGTG
GGGCCCTGCA TCACCTCCAT CATCGACATG CGCGATGAGA AGGACTGGAC GCAGCGCATG
GTGATCGAAG AGGGGTCGAT CCCGGGAGCC CTCGGCCGCG CCATCGTGCC CGCCATGGCC
GCCGCATCGA CGCAGATCGG ACGGCCGACC TCTACCGGGG TGGCCGCCAA GATAGCGCAC
GCCGCCAGAG AGGTGGAGAG CGCGGTACTG GGGCCCTACT ACGGGGCGGT CAATCGCCTG
CAAACCTATC TGATCATGAG CCACGACAAT GGCGCGGGCG AGATGAAGCT GGACGACCAC
GACCAACTGC GCGTCCACTG GCCCGGCGTG GGAGAACAGC CCAACTTCAA GATCGGCAAC
GACCGACTGT ATGACGCCAC GCGCGCACTG GGCGGCACCT ATGTTCCCAA TCCCATCTGG
ACCGACCTGT TCAAGCACAG CCTGATCACC GTCCACCCGC TGGGCGGGTG CGTGATGGGC
GAGGACGCGG CACAGGGCGT CGTCAACCAC AAGGGGCAAG TGTTCAGCAG CGCGTCAGGC
AGCGATGTCT ACCCGGGGCT GTACGTGACC GATGGCTCGG TCATCCCCAC TTCACTGGCG
GTCAACCCAT TGCTGACCAT TTCGGCTGTC AGCGAGCGAA CGATGGCCTT GCTGGCGCAA
GACCGGGGCT GGAAGATCGA CTACACCTTG CCGTCGGCGC CCAGCAAGCC CGCCCGGCCC
GTCAAGCCGG GCATCGAATT CACCGAAGCC ATGAAAGGGT ATGTCTCCCT GGCCCATCGA
CAGGCGCAAG GCACCGATCC CGCCGTCTAC GAGGCGGCCT ACCAGGCCGG CAAGGACGCT
GGGTCCACCA TGGCGTTTAT CGTGACGATC AGGTCCGACG ACCTGGACCA ATTGATCGCC
AATCCCCAGC ATCCGGCCAC GATCGTCGGC ACACTGAATG CCCCCGCTTT GTCTGCGCGG
CCGCTGACGG TGAGCCATGG CGTGTTCAAT CTGTTTGAGG CATTTCCGGA ACAGGTTGGC
GTGCGGCACA TGAACTACAA CATGGCGCTA ACCGCCGAAG ACGGCAAGGA ATACTTCTTC
AGCGCCTTCA AGTCGGTGCC CAGCGACCAC AGCGTGTTGC GAGCGTGGGC CGACACCAGC
ACGCTCTATG TCACGGTCTA CGACGGCACG GACAACACCG GACCGGTCGT CGGATCGGGC
GTCCTGCATA TCGAACCGGC CGACTTCGCC AAGCAGATGA CCACGATGAA GGTCCTCAAC
GCCTCCGGCG AGGCTGAGCG CCTGAAAGAT CTGGCCCGTT TCGGCAAGTA TTTTGCCGGG
GTGCTATGGG AGAGCTACGG CGGGGTACTG GCCGGGAACG CCTACTTCAA CCCGGATGCC
CCTCCGCGCA AAAAGCGCCC GCTCAACGCC GGCGCGCCGG AAGTGCTGTT CTTCCAGACC
GAGGACAACG TGACGCTGCG CCTGACCCGC TTTCAGGGCG GCAGCAAGGG GCCGGTGATG
CTGGTGCACG GCCTGGGCGT GGGGTCGAAC ATTTTCTCGA CCGACACCAT CGCCACCAAT
CTGCTGGAGT TCCTCTACCA GCACGGCTAC GACGTCTGGT TGCTCGATTT CCGCGTCAGC
ATCTTGCTGG AGGCCAGCCG GCAGCAATGC GATGGCGACC AGATCGCGCG GTACGACTTC
CCGGCTGCCA TCGACCGGAT TCGCCAAGCC ACCGGAGCCG ACGACGTGCA ATGCGTGGTG
CATTGCTATG GCGCCACCAC GTTTTTCATG TCCCTGCTGG CCGGTCTGCA GGGTGTGCGC
TCCGTCGTGT GCTCGCAGAT TGCCACCGAC ATCGTCGTGC CCCCGGCAAC CGCCGCCAAG
ACCGGGCTGC ACATCCCATC GGTGCTGGAC AAGCTCGGCG TGAAGTCCCT CACCGCCTAT
ACCCAGGCCA ACGCCGACTG GCTCGAAAAA CTCTATGACA CGGCGCTTAA AGGCTATGCG
CTGGTCGAAG CACAAGGCTA TTGCAACAAC CCGGTCTGCC ACCGCATCAC CTTCATGTAT
GCCTCGCTGT ACCGCCACGA AACGCTCAAC GAATCCCTGC ACGACAACCT GCATGAGCTG
TTCGGCGTGG CCAACATGCG GACCATGGAG CATCTTGCCC TGATGTGCCG GACGGGCCAT
CTGGTGGGCT TCGGCGGAGA AGACATCTAC ATGCCGCACC TGGACAGGCT CCAGTTGCCG
ATCCTGTTCA TCAGCGGAGC GCAGAACGAA TGCTATCTGC CTGAAAGCAC CCGGCGCACG
TATCAGCAAC TGGTGGATCG CTTTGGCCCG GAACGGTACA GCCGGCTGGT CATACCGGGA
TACGGCCATA TCGACTGCAT GTTTGGCAAG AATGCCGCCA TGGATGTCTA TCCGGCCATC
CTGGCCCACC TGGACAAAAC CGCCTCGGCC TGA
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| Protein sequence | MVRIATPLSE IKEHYDIVVI GSGYGGGIAA SRMARAGRTV CLLERGREII PGEYPNTLAE
ATEEFQVHHP DGHIGSRTGL YDLHVNAQQN VVVGCGLGGT SLINANVSLE PEPQVFEDPR
WPRHVREHAD TLLKEGFARA REMLRPTPYP GTAAALPKLQ ANEKSASQMQ APHTFYRPPI
NVTFDDLPDN RNHVGVEQLR CNDCGDCVSG CNNKAKNTTL MNYLPDASNH GAEIFCQASV
RYLERDGDGW IVHYQYVGTG REAFDAPTLF VKANIVVLSA GTLGSTEILL RSRTQGLLLS
EKLGKHMSGN GDILGFGYNN NDKINGIGFG AHSGKGIGPV GPCITSIIDM RDEKDWTQRM
VIEEGSIPGA LGRAIVPAMA AASTQIGRPT STGVAAKIAH AAREVESAVL GPYYGAVNRL
QTYLIMSHDN GAGEMKLDDH DQLRVHWPGV GEQPNFKIGN DRLYDATRAL GGTYVPNPIW
TDLFKHSLIT VHPLGGCVMG EDAAQGVVNH KGQVFSSASG SDVYPGLYVT DGSVIPTSLA
VNPLLTISAV SERTMALLAQ DRGWKIDYTL PSAPSKPARP VKPGIEFTEA MKGYVSLAHR
QAQGTDPAVY EAAYQAGKDA GSTMAFIVTI RSDDLDQLIA NPQHPATIVG TLNAPALSAR
PLTVSHGVFN LFEAFPEQVG VRHMNYNMAL TAEDGKEYFF SAFKSVPSDH SVLRAWADTS
TLYVTVYDGT DNTGPVVGSG VLHIEPADFA KQMTTMKVLN ASGEAERLKD LARFGKYFAG
VLWESYGGVL AGNAYFNPDA PPRKKRPLNA GAPEVLFFQT EDNVTLRLTR FQGGSKGPVM
LVHGLGVGSN IFSTDTIATN LLEFLYQHGY DVWLLDFRVS ILLEASRQQC DGDQIARYDF
PAAIDRIRQA TGADDVQCVV HCYGATTFFM SLLAGLQGVR SVVCSQIATD IVVPPATAAK
TGLHIPSVLD KLGVKSLTAY TQANADWLEK LYDTALKGYA LVEAQGYCNN PVCHRITFMY
ASLYRHETLN ESLHDNLHEL FGVANMRTME HLALMCRTGH LVGFGGEDIY MPHLDRLQLP
ILFISGAQNE CYLPESTRRT YQQLVDRFGP ERYSRLVIPG YGHIDCMFGK NAAMDVYPAI
LAHLDKTASA
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