| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05806 |
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| Symbol | RSp1456 |
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| ID | 1223768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1830271 |
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| End bp | 1831743 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637241319 |
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| Product | putative outer membrane lipoprotein |
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| Protein accession | NP_523015 |
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| Protein GI | 17549675 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.300905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACGGAT GGAAACGATG CCGGCGTCTG CGGACGCGGC TGGCGGCACT TGCCGGCGGC
CTGGCGCTGA GCGCCTGCGC CCTGCAGCCG CCGTACCAGG CGCCGCAGAC GGCGATCGCC
ACCCAGTGGC AGGCGGAGCG GCCGCATGGC GCCAGCGTCA CGAGCCTGGT GGATTGGTGG
AGCCGGTTCA ACGATCCGGC GGTGGCCGAG CTGATCCGGC GGGCCGAAGC CGACAGCCCG
TCGCTGGCCA AGGCGGTGGC GCAGATCAAC AGCGCGCGCG CCACGCTGGT GTCCAACGGC
GCCGACGCAT GGCCCGCCCT GACCGGCAGC GCGTCGGTCA CGCGGGCCAA GTCGGCCACC
GCCGCCGGCG ACACCACCGT GTCCAGCCTG TCGACCACGC GCAGCGGCGG ACTGGACGCC
TCCTGGGAGA TCGACCTGTT CGGCAAGGTT CGCGCCAGCC GCCAATCGGC GCAGGCGCAG
CTGGAAGCCC GCATCGACGA TTGGCATGAC GCGCGCGTGT CGCTGGCCGC GGAAGTGGCG
GACGACTATG TGCAATATCG GGCCTGCCGG CAGCTTGCCA AAGCGTATGC GCAAGCGGCG
GCTTCCCGCG CGCAGACCGC CAAGTCAACG CGCGCCGCGG TGGCCGCGGG CATGACCGCG
GCTTCCGACG GCTATCTGGC GGAGGGCAGC ACGGCCAGCG CCAATGCAAC GGCCACGGAG
CAGAGCGTCG CGTGCGAGAC GCTGGTCAAA TCGCTGGTCG CGCTCACGGG CACGGACGAG
CCCACCCTGC GCGGCATCAT CGACCGCCCC GGCGCGCCCG ACCTGCCGCA GCCCGACACC
TTCAGCGTGA CCAGCGTGCC GGCCGACCTG GTGCGCCAGC GCCCCGACCT GGCCTCGGCC
GAGCGCGATC TGGCGGCCGA CTATGCGTCG ATCGCGAAGG CCCGGGCGAA TCGTTTCCCG
AGCCTGTCGC TGTCGGGGTC GATCGCGATC TCGGCCACCA CCCTCGCCGC GCCGATGTCG
AGCTGGTCGT TCGGTCCGAG CCTGTCGGTG CCGCTGTTCG ATGCCGGCCA GCGCAAGGCC
GCGGTGGATT CGGCGCAAGC CACCTACGAC GCGCAGCTCG CCACGTATCG CAGTTCGGTG
CGCACGGCGG TCAAGGAGGT CGAGCAGGCG CTGGTCGCGC TCGACGGCGC CGCGCGCCGC
AGCGACGACG CGCGCCAGGC CGCCGAGCAA TACCGCCGCT ACGTCAGCGC CATCGAAACC
AACTGGCGGG CCGGCCTCGA CACCCTGCTG ACGCTGGAAG AAGCCCGTCG CTCGGCCACC
ACCGCCGAGA TCACGCTCAT TGAACTGCAG CGGGACCGCG TGCGCGACTG GATCACGCTC
TACAAGGCAC TGGGCGGCGG CTGGCAGGCC GACCAGGCCC TGGCCTCGAC CCCTCATGCC
ACCGCTGCGC CCGCACAAGG AACGACACCG TGA
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| Protein sequence | MDGWKRCRRL RTRLAALAGG LALSACALQP PYQAPQTAIA TQWQAERPHG ASVTSLVDWW
SRFNDPAVAE LIRRAEADSP SLAKAVAQIN SARATLVSNG ADAWPALTGS ASVTRAKSAT
AAGDTTVSSL STTRSGGLDA SWEIDLFGKV RASRQSAQAQ LEARIDDWHD ARVSLAAEVA
DDYVQYRACR QLAKAYAQAA ASRAQTAKST RAAVAAGMTA ASDGYLAEGS TASANATATE
QSVACETLVK SLVALTGTDE PTLRGIIDRP GAPDLPQPDT FSVTSVPADL VRQRPDLASA
ERDLAADYAS IAKARANRFP SLSLSGSIAI SATTLAAPMS SWSFGPSLSV PLFDAGQRKA
AVDSAQATYD AQLATYRSSV RTAVKEVEQA LVALDGAARR SDDARQAAEQ YRRYVSAIET
NWRAGLDTLL TLEEARRSAT TAEITLIELQ RDRVRDWITL YKALGGGWQA DQALASTPHA
TAAPAQGTTP
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