Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS05540 |
Symbol | RSp0081 |
ID | 1222629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 90322 |
End bp | 90921 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637239940 |
Product | hypothetical protein |
Protein accession | NP_521642 |
Protein GI | 17548302 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00436113 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTACA CCATTCACCG CTACCCCGCC CACTGGATCG ATCGCTGGAC CATGCACGAC GGCACGGTCG CCACCGTGCG CCCCATCCTG CCGCAGGACG CGCCGCTGGA GGCCGCGCTG GTCGACGGGC TGTCGTCCGA GTCGCGGTAT GCGCGTTTTC TGGTCGGCGG CGGGCACTTG TCCGATGAGA TGCTCGCTGC CTACACGCAG GTCGATTATG TGAATCACCT GGCGCTGGTG GTCAGCGTGG CCGACGCCGA TGGCGCCGGC GAGCAGTTGA TCGCCGATGG CCGCTTCGTG CTGGAGGACG GCGTGGCCGA ATTCGCCCTG CTGGTGGCCG ATGCGTGGCA GGGCAAGGGC GTCGGCCGGC GCCTGTTTGC GATGCTGGTC CGGGCCGCGC GCGCGGCGGG CGCGCGGGAG GTCTTCGGCG AAGTGCTGTC GATGAACCGC CGCATGATCG CCCTGGCCTG CGATGCCGGC TTCCACGTCG CCAGCGTGCC GGGGGATGCG ACGGTCTGCA CCGTGCGCCT GGTGCTCGCC GACCACCGGC AGGCCCCGGT GGCCGCCATG CCCTTTCCGT TCGCCGCGAT CGCCGGCTGA
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Protein sequence | MLYTIHRYPA HWIDRWTMHD GTVATVRPIL PQDAPLEAAL VDGLSSESRY ARFLVGGGHL SDEMLAAYTQ VDYVNHLALV VSVADADGAG EQLIADGRFV LEDGVAEFAL LVADAWQGKG VGRRLFAMLV RAARAAGARE VFGEVLSMNR RMIALACDAG FHVASVPGDA TVCTVRLVLA DHRQAPVAAM PFPFAAIAG
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