Gene RS05505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS05505 
SymbolRSp1115 
ID1223427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1413135 
End bp1413947 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content64% 
IMG OID637240980 
Productputative transcription regulator protein 
Protein accessionNP_522676 
Protein GI17549336 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATT CTGTCCAGTA CCAGCAAGTC GCCGACGTGC CCGGCCTGGT GCTGAGCGCG 
GGTCGCTTCT CGCAATTCAG TTTCGAGCGG CATTTCCACC TGGATTTCCA TGTCGGGCTG
GTCACCGCCG GCGTGCAGCG CCAGCGCTTC AAGGGCAAGA CCGTCTTGCT CGGCCCCGGG
TGTATCTCCC TGATGCCGCC CGGCGAAATC CACGACGGCG TGGCCGAAGG TGACGGCGCA
TACACACTCA AGACGTTCCG GCTCTCGCAA GCACTCTTGG CGAATCTGGC CCAGGACATC
AGCGGCACGG ATCATGAGCC GGAACTCGCC GCGACCTTGC TCGAAGACCC GGCACTGGCC
GGCCACCTGC TCCGCCTGCA CGACGCCATG CAACACAGCG GCGCCAGCAC GCTCCAAGTG
CAGTCGGAAT GGCTGGCCCT GCTGGCATTT TTACTCAAGC AATCGCGCGC GCTCATTCCG
GAGCACACCA AGGGCGCGCT CTCGCCGGCG CAATGGCAAC GGGTCAGGGA CTATTGCTTC
GCCCACGCCG GTGAAAGGAT CACGCTGGAC GATCTGGCAT CCCTGTGTGC CCTGGGCCGC
TTCCAGTTTC TCAAGCAGTT CAAGCAGACC GTGGGGATGA CGCCGCACGC GTGGCTGGTC
CGCCTGCGCC TGGAGCAGGC CTGTTCGCTG TTGTCGAGTC GCTCCAAGGC GATCGCCGAG
GTCGCGCAAG AAGTCGGGTT CTACGACCAA AGCCACTTCA ATCGGGCGTT CCGGCAGGCC
TTCGGGGTGG CGCCTTCGCA CTATCAGTCC TAG
 
Protein sequence
MADSVQYQQV ADVPGLVLSA GRFSQFSFER HFHLDFHVGL VTAGVQRQRF KGKTVLLGPG 
CISLMPPGEI HDGVAEGDGA YTLKTFRLSQ ALLANLAQDI SGTDHEPELA ATLLEDPALA
GHLLRLHDAM QHSGASTLQV QSEWLALLAF LLKQSRALIP EHTKGALSPA QWQRVRDYCF
AHAGERITLD DLASLCALGR FQFLKQFKQT VGMTPHAWLV RLRLEQACSL LSSRSKAIAE
VAQEVGFYDQ SHFNRAFRQA FGVAPSHYQS