Gene RS05432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS05432 
SymbolRSp1155 
ID1223467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1454072 
End bp1456819 
Gene Length2748 bp 
Protein Length915 aa 
Translation table11 
GC content70% 
IMG OID637241020 
Producthypothetical protein 
Protein accessionNP_522716 
Protein GI17549376 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTT TCACCCCGGC CCACGCTGGT GCCTATCCTG TCGACGCTGT CCTCGTATCG 
GAGCCCGTGG TGCGCCCGGT GGATCCGCCC CTCGCCGCCG CGCTGGCGGA CGCGGTGGAA
TTCGATACGC TCGCGTGCCT GTCGGCCGAT GCCGTGCTGG TGGTGGTCGA CGGGCGCATC
GTCCAGGGCA ACCAGGCCGC CACGCATCTG CTGGCCGCGC CGGTGCCCGA GTGGCTGGCC
GGCGTGGCGC TCACCAGCGT GATCCATCCG GACGACGTCG GGCTGGTCAT GCCGAGCCTG
TCGCGCGCTG CCGCCGGTAG CGTGCCTGCC GACCCCATCG AACATCGCCT GGTGCGTGCC
GATTTCACCC ACGTGCTGGT CACCAGCGAA GCCGCGCGCT GCACGCATGC CGGGCAGCCG
GCGGTGATGC TCGTCCTGCG CGAGGCGGGT TCGCGCCATG CGCTCGAACG CAATGCCGTG
CAGGCCCGCG CAGAGGCCCT GCACGCGCGC CGCCTGCTGG CCTCGGAGAA TGCCGTGCTT
GCGCAACTCG CTTCCAATGC TTCGCTGTCG ACCGTGCTGC GCCATCTGTG CCTGTATGTC
GAGCAGGTCT ATCCGAACGC GATGTCGGCC GTGCTGCTGC TCGATGCCGA GCGCCAGACG
CTGGGCGTGG CCGCGGCGCC CACGCTGCCG GCCGCCTATG CCACCACGCT GGAGGGCTCG
CCCATCGGCC CCGATGCCGG CGCCTGCGGC TGCGCGGCGT ATCTGGGCGA TGCCGCGCTG
ATCGGCGATA TCGCCACCGA CCCGCGCTCG CAGCATGACC GCACGGCGGC GCTTGCCGCC
GGCTTCGCCT CCGCCTGGGC GCTGCCGATC CGCGCTTCGC GCGGCGACAA ACTGGGCGTG
CTGGCGCTGT TTCACCGCCA GTCCTGCCTG CCGACCGAGG ACGAGCAGCA ATTCCTCGAC
GACGTCACGC ACCTGGCCGG CGTCGCCATC CAGAAGGACG CCACCGAGCG CGGCCTGGCC
GAGAGCGAGG AGCGCTACCG GCTGGCGGTC TCGCACCTCA ACGAAGGCGT GCTGATCCAG
ACGCTGGACG GCGTGGTGCT GGCCGCCAAT GCCAGCGCCG AGCGCATCCT GCGCGTGCGT
CCGGGGCAAC TGGTCGGGCG CAACCGGTTC GACATGATGC AGCGCGTGGT CGACGAGCAC
GGCAAGGATG TCGCGCTCGA CGTGCTGCCC TCGAAGCTGG TGCGGCAGAG CGGCGAAGCC
ATCCTCGGAC GCATCTACGG CCTGCTGCTG AAGACCGGCG AGCTGATCTG GGCCCGGATG
AACATCATCC CGATCCGTCG CCATGGCGAT GCGGCACCGT CCAGCATCAT GCTGTCGTTC
GCCGATATCA CCGATTTCAA GCGCGCCGAG CAGCGCCTGC GCCATCTGGC CTCGCACGAT
GCGCTGACCG GGCTGACCAA CCGCAGCTTC TTCATCGCCC ACCTGGACAG CGCCATTGAG
CGTGCCCGCG ACGAGAGCCG CGAGCTGGCC CTGTTCTTCC TGGACCTGGA CCGCTTCAAG
AGCGTCAACG ACACCGCCGG CCATGCCTGC GGCGACACCC TGCTGCAGAG CGCCGCCGCG
CGCCTGACCG ACTGCATCGG CCCCGGCGAC GTGATCGCCC GGCTGGGCGG CGACGAGTTC
GTCATCCTGA TCGAGCAGCG CGTCGAGGGC AAGCGCATCG CGCAGCTGGC CGAGCGCCTG
CTGGCGGCCA TGCGCGAGCC GTTCGATACC GTCAATGGGC GCTATTACCT GGGCGTGTCG
ATCGGCGTGG CGCTGTATCC GCACGACGGC ATCTCCGGCT CCGACCTGCT GCGCTCGGCG
GACGCGGCGA TGTACCGCGC CAAGCAGAAC GGCCGCAACC GCGCGCAGTT CTACACGGCC
GAGCTCAATG CCCGCCTGCA GCGCCGCTAC CTGCTGGAAA CCGCGCTGCG CGACGCGCGC
GACAACAGCG AGCTGCAGCT CGTCTACCAG CCCAAGTACG ACCTGGCCAG CCATCGCATC
GTCGGCGCCG AGGCGCTGCT GCGCTGGAAC AGCGTCAAGC TGGGGGCGGT GTCGCCGGCG
GAGTTCATCC CGGTGGCCGA AGAGACCGGG CTGATCGTGC CGATCGGCGA GTGGGTGCTG
CGCCGCGCCT GCGAGCAGGC CGTGGAGTGG TATCAGGCGC TGGGCTACGA CTTCCGCATG
GCGGTCAACC TGTCCGCGCG TCAGTTCCAG ACCGGCGACG TGGTGCCGAC GATCGAGCAG
ACCCTGGCCG AGACCGGCCT GCCGCCGACC GCGCTGGAGG TGGAGATCAC CGAAAGCCTG
CTGATGGGCG GCGCCGACGA GGTGCGCCCG ATGTTCGACG CGCTCACCGC GCAGGGCATC
CGCATTTCCA TCGACGATTT CGGCACCGGC TATTCGTCGC TGTCGTACCT GCAGCGCTTC
CCGATCAGCA ACGTGAAGAT CGACCGGTCG TTCATCCTCG GCATTCCCGG CGACCCCGAC
TCGGTGGCGC TGACGGAGGC CATCGTCGCC ATGGCCCGCG CGCTGGGCAT GACGGTCACC
GCCGAAGGCG TGGAAGACGC CGACCAGGTG GAGTTCCTGG CCAAGGCGGG CTGCCAGGAG
ATCCAGGGCT ACTACATCGG CAAGCCGGTC ACCGCCGAGG GGTTCGACCG GCTGCTGCGG
GCGCACCTGG CGGTGGTCGA TGCCGGGGTG CGCACGGCGG CGGGCTGA
 
Protein sequence
MTRFTPAHAG AYPVDAVLVS EPVVRPVDPP LAAALADAVE FDTLACLSAD AVLVVVDGRI 
VQGNQAATHL LAAPVPEWLA GVALTSVIHP DDVGLVMPSL SRAAAGSVPA DPIEHRLVRA
DFTHVLVTSE AARCTHAGQP AVMLVLREAG SRHALERNAV QARAEALHAR RLLASENAVL
AQLASNASLS TVLRHLCLYV EQVYPNAMSA VLLLDAERQT LGVAAAPTLP AAYATTLEGS
PIGPDAGACG CAAYLGDAAL IGDIATDPRS QHDRTAALAA GFASAWALPI RASRGDKLGV
LALFHRQSCL PTEDEQQFLD DVTHLAGVAI QKDATERGLA ESEERYRLAV SHLNEGVLIQ
TLDGVVLAAN ASAERILRVR PGQLVGRNRF DMMQRVVDEH GKDVALDVLP SKLVRQSGEA
ILGRIYGLLL KTGELIWARM NIIPIRRHGD AAPSSIMLSF ADITDFKRAE QRLRHLASHD
ALTGLTNRSF FIAHLDSAIE RARDESRELA LFFLDLDRFK SVNDTAGHAC GDTLLQSAAA
RLTDCIGPGD VIARLGGDEF VILIEQRVEG KRIAQLAERL LAAMREPFDT VNGRYYLGVS
IGVALYPHDG ISGSDLLRSA DAAMYRAKQN GRNRAQFYTA ELNARLQRRY LLETALRDAR
DNSELQLVYQ PKYDLASHRI VGAEALLRWN SVKLGAVSPA EFIPVAEETG LIVPIGEWVL
RRACEQAVEW YQALGYDFRM AVNLSARQFQ TGDVVPTIEQ TLAETGLPPT ALEVEITESL
LMGGADEVRP MFDALTAQGI RISIDDFGTG YSSLSYLQRF PISNVKIDRS FILGIPGDPD
SVALTEAIVA MARALGMTVT AEGVEDADQV EFLAKAGCQE IQGYYIGKPV TAEGFDRLLR
AHLAVVDAGV RTAAG