Gene RS05397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS05397 
SymbolRSp0936 
ID1223243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1183372 
End bp1184154 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content68% 
IMG OID637240796 
Producthypothetical protein 
Protein accessionNP_522497 
Protein GI17549157 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.491165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCG ATCTCAACGC AGATCTGGGC GAGGGCTATG GCCCGTGGCG CATGGGGGAC 
GACGAGGCGA TGATGTCGCT GATCTCATCG GCCAACATCG CCTGCGGGTT TCACGCCGGA
GACCCGCTGA TCATGGACCG CACCGTTCGC CTGGCGATCG AGGGCGGTGT GGATGTGGGC
GCGCATGTCG GCTTTCCGGA CCGGCAGGGC TTCGGGCGAC GGTTCATGCA GGTCGACATC
CCCGATCTCA CGGCGATGGT GACTTACCAG CTCGGTGCCT TGGCAGGGAT TGCCCGGGCG
CACGGCCGCC GCGTGACGCA CATGAGCTTT CACGGCGCGC TCGGCAACCG GGCCGCGGCG
GATCCTGCCT GGGCGACGCC GCTGCTGAAG GCGATCGCGG CGTTCGATCC GAACCTCATC
ATCAGCACGT CCAGCAGCCA GGCGATCGAA GGGGCGGCCG CGGCGTTCGG GCTGCCGGTT
GGCGTCAGCT TTCTGGCCGA TCGGGCTTAT GACGACCAGG GCCTGCTCGT CAGCCGCGGC
CTGCCCGGTG CGGTGATCCA CGACGAAGCA CAGGTACTGG CCCGCGTGCG GCGCCTGCTG
ACGGAAGGCA CGATCGTGAC GCACGCCGGC AATGTCCTGC CGATGCAGCC GCGCTCGATC
CTCGTCCATG GAGATACCCC CGGTGCGGTG GCGCTGACGC AGCGCCTGCG CGCGGAGATT
GAATCACTCG GCGGGCGCAT CGTGCCGATC TCGCAGCAGC TTGGGTTCTC CACCGTGCCG
TAG
 
Protein sequence
MEIDLNADLG EGYGPWRMGD DEAMMSLISS ANIACGFHAG DPLIMDRTVR LAIEGGVDVG 
AHVGFPDRQG FGRRFMQVDI PDLTAMVTYQ LGALAGIARA HGRRVTHMSF HGALGNRAAA
DPAWATPLLK AIAAFDPNLI ISTSSSQAIE GAAAAFGLPV GVSFLADRAY DDQGLLVSRG
LPGAVIHDEA QVLARVRRLL TEGTIVTHAG NVLPMQPRSI LVHGDTPGAV ALTQRLRAEI
ESLGGRIVPI SQQLGFSTVP