| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05368 |
|---|
| Symbol | RSp0827 |
|---|
| ID | 1223134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 1044254 |
|---|
| End bp | 1045840 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637240687 |
|---|
| Product | ketoglutarate semialdehyde dehydrogenase protein |
|---|
| Protein accession | NP_522388 |
|---|
| Protein GI | 17549048 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.588855 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCTGA GCGGCGAACT GCTGCTGGGT GCGGCCCGCG TGGCGGGCGG CGCCGGAACC
GTTCGCGCCA TGAACCCGGC CACGGGCGAA TGGCTCGACC CCCAATTCAC CCTGGCCAGC
CGGGCCGACG TTGCCCGCGC CTGCGAACTC GCCGGCGCGG CGTTCGACGT TTACCGCGAG
ACCGCGCCCG AAGCGCGCGC CCTGTTCCTG GAGGCCATCG CCAGCCAGAT CGAGGTGCTG
GGCGACGTGC TGATCGAGCG CGCCATGGCG GAATCCGCGC TGCCGCGCCC GCGCCTGGAA
GGCGAGCGCG GCCGCACCTG CAACCAGCTG CGCCTGTTCG CCAAGGTGGT GCGCGCGGGC
GATGCCGTCG GTGCGCGCAT CGATCCGGCG TTGCCGGAAC GCAAGCCGCT GCCGCGTTCG
GACCTGCGCA TGCGCCGCAT TGCCATGGGG CCGGTGGCCG TGTTCGGCGC CAGCAATTTC
CCGCTGGCCT TCTCGGTGGC GGGCGGCGAT ACGGCGTCGG CGCTGGCGGC GGGCTGCCCG
GTGGTGGTGA AGGCGCATCC GGCGCACCCG GGCACGTCCG AGCTGGTCGG CCGCGCCATC
CAGGCCGCTG TGGCGCAGTG CGGGCTGCCG GAGGGCGTGT TCTCGCTGGT GCTGGCCGAC
AACGAGGCCG CCGGCGCGCT GGTGGCCGAT CCGCGCATCC AGGCGGTCGG CTTCACCGGC
TCGCGCGCGG GCGGGCAGGC GCTGCTGCGC ATCGCGCAGG CGCGTGCTCA GCCGATTCCC
GTGTACGGCG AGCTGAGCGC CATCAATCCG GTCTTCCTGC TGCCCGACGC GCTGGCCAGG
CGCGCGGCGG CGCTGGGCCA GCAGTATGTC GGCTCGCTCA CCATGGGCGC GGGACAGTTC
TGCACCAACC CGGGCCTGCT GCTGGCCATC GACGGGCCGG ACCTCGACGC CTTCGAGGCC
GCCGCCGCCG AGGCCCTGCA GGCCAGCGCC GCGCAGACCA TGCTGAGCTC CGGCATCCAC
GCCGCGTACA GCCGCGGCGT CGAACGCCTG GCCGGCGAGG CCAACGTGCG CTGCGTGGCG
CGCGGGCAGG GCAGCGATGC GCCCAACCGC GGCCAGGCCG GCTTTTTCCG CACCGACGCC
GAGAGCTTCC GGGCCCAGCC CGCGCTGCAT GACGAGATCT TCGGCGCCAC CGGCCTGGTC
GTGCGCTGCC GCAATGCCGA GGAGCTGAAA GCGCTGGCCG AGTCGCTCGA AGGCCAGCTG
ACCGCCACGC TGCACCTGGA TGCGGGCGAT ACGGCACTGG CCCGCGCACT GCTGTCGATC
CTGGAGCGCA AGGCCGGCCG CATCCTCGCC AACGGCTGGC CGACCGGCGT GGAGGTCTGC
CATGCCATGG TGCACGGCGG CCCCTGGCCG GCCACGACGG ACACCCGCAC GACCTCGGTC
GGCACGGCGG CCATCGAGCG CTTTCTGCGC CCGGTGTGCT ACCAGGATCT GCCCGCCGAA
CTGCTGCCGG CGGCCCTGCG CGACGACAAT CCGCAGCAGT TGCGGCGGCT GGTCGACGGC
GCCTGGACCG TGCCGCGCGA GCGCTGA
|
|---|
| Protein sequence | MYLSGELLLG AARVAGGAGT VRAMNPATGE WLDPQFTLAS RADVARACEL AGAAFDVYRE
TAPEARALFL EAIASQIEVL GDVLIERAMA ESALPRPRLE GERGRTCNQL RLFAKVVRAG
DAVGARIDPA LPERKPLPRS DLRMRRIAMG PVAVFGASNF PLAFSVAGGD TASALAAGCP
VVVKAHPAHP GTSELVGRAI QAAVAQCGLP EGVFSLVLAD NEAAGALVAD PRIQAVGFTG
SRAGGQALLR IAQARAQPIP VYGELSAINP VFLLPDALAR RAAALGQQYV GSLTMGAGQF
CTNPGLLLAI DGPDLDAFEA AAAEALQASA AQTMLSSGIH AAYSRGVERL AGEANVRCVA
RGQGSDAPNR GQAGFFRTDA ESFRAQPALH DEIFGATGLV VRCRNAEELK ALAESLEGQL
TATLHLDAGD TALARALLSI LERKAGRILA NGWPTGVEVC HAMVHGGPWP ATTDTRTTSV
GTAAIERFLR PVCYQDLPAE LLPAALRDDN PQQLRRLVDG AWTVPRER
|
|---|
| |