| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05323 |
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| Symbol | RSp1278 |
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| ID | 1223590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1617775 |
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| End bp | 1619205 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637241141 |
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| Product | transporter transmembrane protein |
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| Protein accession | NP_522837 |
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| Protein GI | 17549497 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCCT TCGCCTCCGT CGACAAATCC CTGCAACCGC TGCTGTGGCT GGTGGCGGTC
GGCCTGTTCA TGCAGACGCT GGATGCCACC ATCGTCAACA CGGCCCTGCC GGCCATGGCG
CGCAGCCTGT CGGAAAGTCC GCTGCAGATG CAGTCCGTCA TCATCGCCTA CACGCTGACG
ACGGCCATGC TGATGCCTGC GTCCGGCTGG CTGGCCGACC GGTTCGGCAC CCGCCGCATG
TTCTTCGCGG CCATCTTCCT CTTCAGCGTC GGCTCGCTGC TGTGCGCGGA GTCGCGCACG
CTGACCATGC TGATCGTCGC GCGCGTGGTG CAGGGCGTGG GCGGTGCGCT GCTGATGCCG
GTGGGGCGGC TGACCGTGCT GCGCGTGGTG CCGCGCGAGC AGTTCCTGCC GGCCATGAGC
TTTGTCACGA TTCCGGGTTT GATCGGTCCG CTGATCGGCC CGACCCTGGG CGGCTGGCTG
GTCGAGGCGG TGTCGTGGCA CTGGATCTTC CTGATCAACC TGCCGGTGGG CGTCGTCGGC
GCGCTGGTCA CGCTCAAGGT GATGCCCGAC GTGCGCGGCG ATGCCGCCGA TGCCGCCGAT
GCCTTCGACT GGGCCGGCTA CCTGATGCTG GCGTTCGGCA TGGCGTCCGT TTCGTTTTCG
CTCGACGGCC TGTCGGACCT GGGTTTCCGG CGTGCCACGG TGTTGGTGCT GCTGATGTTC
GGGCTCGCCG CGCTCACGGC GTACTGGCTG CACGCCGGCC GCGCGAAGCA GGCGCTGTTT
CCGCGTGCCC TGTTCGCGAT CCCGAGTTTT TCCGTCGGCA TTCTCGGCAA CCTGTTCGCG
CGCATCGGCG CCGGCGGCAT GCCGTTCCTG ATTCCGCTGC TGCTGCAGGT GGGGCTGGGG
TATTCGCCCA TGCAGGCCGG GTTGATGATG GTGCCGGTGG CGGTCGCGGG CATGGCAGCC
AAGCCGCTGG GCACATGGCT GGTCAAGCGC CATGGCTATC GGCACATGCT GTTCGGCAAT
ACCTTGCTGC TCGGCCTGAT GATCGTGAGC TTTGCGCTGT CGAGCCCGCA GGAGCCGCTG
TGGCTGCGCA TCGTGCAGCT GGCGGCGTTC GGCACCTTCA ACTCGATGCA GTTCACCTCG
ATGAACGCGC TCACGCTCCG GGACCTGAGC GGAGCGCAGG CCAGCGCCGG CAACAGCATG
CTGTCGATGG TGATGATGCT GTCGATGAGC CTGGGCGTGG CGGCTGCCGG GGCGTTGCTC
AATGGCTTCA GCGAATACGC GGGCGGGCAG CCGGCCGATA CGCTGGGCGC TTTCCACAAG
GCCTACATCT GCTTGGGCCT CATCACCACC GCCGCGGGGT GGATCTTCGC GCAGCTGCCG
CACGAGGCGG CTCCGCAGAC GGTCAGGCGG ATGGAGGTCG AGACCGAGTA G
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| Protein sequence | MPSFASVDKS LQPLLWLVAV GLFMQTLDAT IVNTALPAMA RSLSESPLQM QSVIIAYTLT
TAMLMPASGW LADRFGTRRM FFAAIFLFSV GSLLCAESRT LTMLIVARVV QGVGGALLMP
VGRLTVLRVV PREQFLPAMS FVTIPGLIGP LIGPTLGGWL VEAVSWHWIF LINLPVGVVG
ALVTLKVMPD VRGDAADAAD AFDWAGYLML AFGMASVSFS LDGLSDLGFR RATVLVLLMF
GLAALTAYWL HAGRAKQALF PRALFAIPSF SVGILGNLFA RIGAGGMPFL IPLLLQVGLG
YSPMQAGLMM VPVAVAGMAA KPLGTWLVKR HGYRHMLFGN TLLLGLMIVS FALSSPQEPL
WLRIVQLAAF GTFNSMQFTS MNALTLRDLS GAQASAGNSM LSMVMMLSMS LGVAAAGALL
NGFSEYAGGQ PADTLGAFHK AYICLGLITT AAGWIFAQLP HEAAPQTVRR MEVETE
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