Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS05318 |
Symbol | RSp1273 |
ID | 1223585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1610524 |
End bp | 1611705 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637241136 |
Product | hypothetical protein |
Protein accession | NP_522832 |
Protein GI | 17549492 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0339389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTCCG ACACCGATAC CGGCCGCTTC AGCTTCCACC GGCAGGACCT CGGCCACACC CTGTGCGACA GCCTGGAGGG CAAGGGGCTG GCGGACGCGC GCTCGGGCCT GTTCCTGGCG GCGCCCCGGC GCACCGGCAA GAGCACCTTC CTGCGCGAAG ACCTGGTGCC CGAAGTGGAA CGCCGCGGCT GGATCGCCAT CTACGTCGAC CTGTGGGCCG ACCGCGCCCG CGACCCCGGG CTGATGATCG CCGATGGCAT CAAGGCCAAG CTGGCCGAAT TCGACGGACC GATCGCCAAG CTGGCCAAGT CGGCCGGCAT GGAAAAGATC AGCGTGCTGC GCACCTTCAC CTTCGACCTC GGCAAGACCG GCCTGCCGCC GGGCGTCACG CTGGCCGATG CGCTGGACAC GCTCTACAGG GCGGCGCGGC AGCCCATCGT GCTGATCGTC GACGAGGCCC AGCACGCGCT CTCCACCGAG GCCGGCACCA ACGCCATGTT CGCGCTCAAG GCCGCGCGCG ACCAGATGAA CCAGGGCGTG GCCTCGCCGC ACCTGTTCCT GGTCTTCACG GGCTCCAACC GCGACAAGCT CGCCAACCTG CTGCTCAACC GCACGCAGCC GTTCTTCGGC TCGCGCGTGA CCAATTTCCC GCTGCTGGGA CGGGCCTTCG TGTCGGCCTA CGCGGCCTGG GTCAACCAGC ACCTGGCACC CGACAACCAG TTCAAGGACG ACGACGTGTT CGCCGCCTTC CAGCTGGTCG GACACCGGCC CGAGATGCTC AAGGCCATCG TCAGCGAGAT CGCGCTGGAG CTGGGCGAGG CGGCCAGCCT GGGCGAGCTG CTCAAGCGCG GCGCGCAGGG CTGGCGCGAC CGCATCTGGG GCGAGATCGA AAGCGAATAC AGCGCACTCA CCGAGATCCA GCGCGCCGTG CTGGCGGTGC TGATCGAGCG CGGCCAGGCC TATTCGCCGT TCGCGGAGGA ATCGATGAAG GCCTATGCCG CGCGCCTGGG CCACAGCGAG TTCTCCACCG CCACGGTGCA GGCCGCGCTG GACGCGCTGC GCGACAAGAA CCTGATCTGG AAGGAATCGC GCGGCGCCTA CGCGCTGGAG GACGAAAGCC TGGCGCTGTG GTTCCGCGAA ACGCGCGGCG CGCACGCCGT GCCGCCGAAG CTGGGGCGCT GA
|
Protein sequence | MDSDTDTGRF SFHRQDLGHT LCDSLEGKGL ADARSGLFLA APRRTGKSTF LREDLVPEVE RRGWIAIYVD LWADRARDPG LMIADGIKAK LAEFDGPIAK LAKSAGMEKI SVLRTFTFDL GKTGLPPGVT LADALDTLYR AARQPIVLIV DEAQHALSTE AGTNAMFALK AARDQMNQGV ASPHLFLVFT GSNRDKLANL LLNRTQPFFG SRVTNFPLLG RAFVSAYAAW VNQHLAPDNQ FKDDDVFAAF QLVGHRPEML KAIVSEIALE LGEAASLGEL LKRGAQGWRD RIWGEIESEY SALTEIQRAV LAVLIERGQA YSPFAEESMK AYAARLGHSE FSTATVQAAL DALRDKNLIW KESRGAYALE DESLALWFRE TRGAHAVPPK LGR
|
| |